| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0429 |
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| Symbol | |
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| ID | 5745966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 460047 |
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| End bp | 461321 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641295492 |
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| Product | conjugation TrbI family protein |
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| Protein accession | YP_001561460 |
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| Protein GI | 160895878 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.082954 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGG ACGACACCCC CGACCTCACC ACGCCGCAGG CGGGCAAGGT CGCGCCCGAG
GCGGTGGCGC TACGCGCCCA GCCGTGTCCG GTCACGCGCC TGAACCGGCG CACGCTGGCC
GTCCTCGTCG GCGGCCTGTC GGTCGCCGTG CTCGGGGCCA CGATCTGGTC ATTGCAGCCG
CATCGGCGCG GCACTGGCGA ACAGACCGAG CTTTACAACG TGGATCGCGT ATCGAAGTCC
GAGGGGCTGG ATGGCCTGCC TTCCGACTAC TCGAAGCTGC GGAAGGTGCC CGAGTTGGGG
CCGCCGCTGC CGGGCGATCT TGGCCCCGCC ATCGTCGCTT CGCAGCAGCC GGCCGTAGCC
GCTTACGCGG CCCCCGGCCA CGATCCGAAT GACGCTTTGC GCAAAGAGGC GGAAGCCGCT
GCGGCTTCGT CGGTGTTCTT CCGCTCCGGC GGCCAGGGCC AAGGCCAGGC CGCAACGGTG
GCGCAGGCGG CGCCGGGTGC GCCGGGTGCT GCAAGCGCGC TCGCAGCCTT CGACCCGCTC
GCCGCCGGGC CGGCCTCGAC GGCGGCCCAG CCCGCCGACC CGACCGCCAC GCAGAACCGG
CAAGACCAGA AGGAGGCGTT CCTGAAAGGC GGCTCTACGG AAACCCGCAA TTCCGGCAAC
CTGGCGCTGC CGGCGTCGCC GTATCAGGTG ATGGCCGGTA CGGTGATCGC CGGGGCGCTG
GTCACAGGCA TCAAGTCCGA TCTTCCGGGC GATGTGATCG CCACCGTCAC GGAGCCCGTC
TATGACACGG CCACGGGCAA GTTCCTGCTG ATCCCGCAGG GATCGCGCAT CCTCGGGCGC
TACAACAGCC AGGTCAGCTA CGGGCAGAGC CGCGTACAGG TGGTATGGAA CCGGGTCATC
CTGCCCGACA CGTCATCGCT GACGCTCGAC AACCTCGTGG GCACCGACCC GGCCGGCTAC
GCCGGCCTGG AAGACGACGT GGACTGGCAC TGGAACCGCG TCTTCGCCGG CGCCGTGTTG
ACGACGCTGC TGGGCGTGGG CGCCGAGCTG GCCGCGCCGG AGAACCGCCA GGACGGCAAC
CGCATCGTCA TCGCCGGGCG CGACAGCGCA CAGGACAGCA TCAATCAGGT CGGCCAGGAG
ATCACTCGGC GCAACATGAA CATCCAGCCG ACGCTGACAG CACGACCGGG CTTGCCGGTT
CGGGTGATCG TGGCGCGCGA CCTCGTGTTG CGTCCTTACC AACCCATGTT CTATCAGCTT
GGAGGTGCGC GATGA
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| Protein sequence | MSQDDTPDLT TPQAGKVAPE AVALRAQPCP VTRLNRRTLA VLVGGLSVAV LGATIWSLQP
HRRGTGEQTE LYNVDRVSKS EGLDGLPSDY SKLRKVPELG PPLPGDLGPA IVASQQPAVA
AYAAPGHDPN DALRKEAEAA AASSVFFRSG GQGQGQAATV AQAAPGAPGA ASALAAFDPL
AAGPASTAAQ PADPTATQNR QDQKEAFLKG GSTETRNSGN LALPASPYQV MAGTVIAGAL
VTGIKSDLPG DVIATVTEPV YDTATGKFLL IPQGSRILGR YNSQVSYGQS RVQVVWNRVI
LPDTSSLTLD NLVGTDPAGY AGLEDDVDWH WNRVFAGAVL TTLLGVGAEL AAPENRQDGN
RIVIAGRDSA QDSINQVGQE ITRRNMNIQP TLTARPGLPV RVIVARDLVL RPYQPMFYQL
GGAR
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