Gene Daci_0416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0416 
Symbol 
ID5745953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp449825 
End bp450295 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content64% 
IMG OID641295479 
ProductF0F1 ATP synthase subunit B 
Protein accessionYP_001561447 
Protein GI160895865 
COG category[C] Energy production and conversion 
COG ID[COG0711] F0F1-type ATP synthase, subunit b 
TIGRFAM ID[TIGR01144] ATP synthase, F0 subunit b 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.489173 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTATCA ACGCGACCCT GTTCGTCCAG GCCATCGTTT TCCTGATCCT GGTGCTGTTC 
ACGATGAAGT TCGTGTGGCC CCCGATCGCG AAGGCGCTGG ATGAACGAGC TCTGAAAATC
GCCGATGGCC TCGCTGCTGC CGACAAGGCC AAGACTGACC TGGCCGCCGC CAACAAGCGC
GTCGAGCAGG AACTGGCCCA GACGCGCAAC GAAACGGCAT CGCGGCTTGC GGACGCCGAA
CGCCGTGCCC AGGCCATCAT CGAAGAAGCC AAGGCCCGTG CCTCCGAAGA AGGCAACAAG
ATTGTTGCTG CTGCCCGCGC CGAGGCCGAG CAGCAGACAG TCCAGGCCCG TGAAGCCCTG
CGCGAGCAAG TGGCTGCGCT GGCCGTCAAG GGCGCCGAGC AGATCCTGCG CAAGGAAGTG
GATGCCGGCG TCCATGCCGA CCTGCTGAAC CGCCTGAAGA CCGAGCTGTA A
 
Protein sequence
MSINATLFVQ AIVFLILVLF TMKFVWPPIA KALDERALKI ADGLAAADKA KTDLAAANKR 
VEQELAQTRN ETASRLADAE RRAQAIIEEA KARASEEGNK IVAAARAEAE QQTVQAREAL
REQVAALAVK GAEQILRKEV DAGVHADLLN RLKTEL