Gene Daci_0414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0414 
Symbol 
ID5745951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp448626 
End bp449489 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content59% 
IMG OID641295477 
ProductF0F1 ATP synthase subunit A 
Protein accessionYP_001561445 
Protein GI160895863 
COG category[C] Energy production and conversion 
COG ID[COG0356] F0F1-type ATP synthase, subunit a 
TIGRFAM ID[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.266481 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCAG ACGCGCACGC ACCTACTGCA AGTGAATACA TCGTTCACCA CCTGCAGCAC 
CTCCAGAACA TCAAGCAAAA GTCGATCATC GACTTTTCGG TCATCAACCT GGACTCGATC
GTCGTCAGCG CCACGCTGGG CGTGCTGAGC CTGTTCGTGC TGTGGCTTGC CGCGCGCAAG
GCCACATCGG GCGTTCCGGG CCGCTTCCAG GCGGCTGTAG AGCTGCTGGT CGAGATGGTG
GACAACCAGG CCAAGGCCAA CATCCACAAC GCGCAAAGCC GCAAGTTCAT CGCTCCCCTG
GCACTGACCG TGTTCGTCTG GATCTTCATG ATGAACGCCA TGGACATGCT TCCCGTGGAC
CTGCTGCCGG TACTGTGGCA GGGCGTCCAG GGTGACTCGC ACGCCTACCT GCGTGTCGTT
CCCACGGCTG ACCTCTCGAC CACGCTGGGC CTGTCCTCGG CCGTGCTGAT CCTGTGCTTC
TTCTACAGCA TCAAGATCAA GGGCATGGGC GGCTGGGCCC ACGAACTGGT GACCGCTCCG
TTCGGCACCA GCAAGAATCC CGTGTTTGCA CTGATCCTGG GTGTTATCAA CCTGGCCATG
CAGATCATTG AATATGTCGC CAAGACGGTT TCGCATGGCA TGCGACTGTT CGGCAACATG
TACGCTGGTG AGTTGGTGTT CTGTCTGATC GCTCTGATGG GCGGTGCGGC TGCCATGTCG
CTTTCCGGTG TGTTGCTCCC CTTGGGGCAC ATCATTGCAG GCTCTATCTG GGCGATCTTC
CACATTCTGA TCATCACCCT GCAGGCCTTC ATTTTCATGA TGCTGACGCT GATCTATCTC
GGCCAGGCAC ATGAAGCCCA CTGA
 
Protein sequence
MAADAHAPTA SEYIVHHLQH LQNIKQKSII DFSVINLDSI VVSATLGVLS LFVLWLAARK 
ATSGVPGRFQ AAVELLVEMV DNQAKANIHN AQSRKFIAPL ALTVFVWIFM MNAMDMLPVD
LLPVLWQGVQ GDSHAYLRVV PTADLSTTLG LSSAVLILCF FYSIKIKGMG GWAHELVTAP
FGTSKNPVFA LILGVINLAM QIIEYVAKTV SHGMRLFGNM YAGELVFCLI ALMGGAAAMS
LSGVLLPLGH IIAGSIWAIF HILIITLQAF IFMMLTLIYL GQAHEAH