Gene Daci_0408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0408 
Symbol 
ID5745945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp443249 
End bp443518 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content60% 
IMG OID641295471 
Productphosphotransferase system, phosphocarrier protein HPr 
Protein accessionYP_001561439 
Protein GI160895857 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1925] Phosphotransferase system, HPr-related proteins 
TIGRFAM ID[TIGR01003] Phosphotransferase System HPr (HPr) Family 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGA CCCCTATAAC CATCAGCAAT AAACTGGGCC TGCATGCCCG CGCCTCCGCC 
AAGCTCACCA AGCTTGCAGG CAGCTTTCCC TGCGAAGTCT GGATGAGCAA GGGCGAGCGG
CGCATCAACG CCAAGAGCAT CATGGGCGTG ATGATGCTGG CTGCCGGCAT GGGCTCCGAG
GTGCTGCTGG AAACCGAAGG ACCGCAGGAG CAGGAAGCCA TGGATGCGCT GACGGCCCTG
ATCAACGACA AATTTGGCGA AGGCCAGTGA
 
Protein sequence
MIKTPITISN KLGLHARASA KLTKLAGSFP CEVWMSKGER RINAKSIMGV MMLAAGMGSE 
VLLETEGPQE QEAMDALTAL INDKFGEGQ