| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0392 |
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| Symbol | rplD |
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| ID | 5745929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 434563 |
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| End bp | 435183 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641295455 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_001561423 |
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| Protein GI | 160895841 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000000956612 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGCTCG AACTCCTGAA TGAACAAGGC CAGGCCGCAT CCAAGTTCGA TGCGCCCGAG
ACTGTTTTCG GTCGTGAATT CAACGAAGAC CTCGTCCACC AGATCGTGAT CGCCTACCGT
GCCAACGCAC GTCAGGGCAC TCGCGCTCAG AAGGACCGCG AGCAGGTTCG TCACACGACT
GCCAAGCCGT TCAAGCAAAA GGGCACCGGC CGTGCTCGTG CCGGTATGTC TTCCTCGCCT
CTGTGGCGTG GCGGCGGCCG CATCTTCCCG AATCTGCCTG AAGAAAACTT CACGCAGAAG
ATCAACAAGA AGATGTACCG CGCCGGTATG GTTGCCATCC TGTCGCAGCT GGCCCGCGAA
GGCCGTCTGG CCGTGGTGGA CTCGCTGAAG CTCGAAAGCC CCAAGACCAA GGTGCTGGCC
GACAAGTTCA AGGCCATGAA CCTGGAATCG GTCATGGTGA TCGCTGAAGA AGTCGACGAG
AACCTGTACC TGGCTTCCCG CAATCTGAAG AACGTGTTCG TGGTCGAGCC GCGCTACGCC
GACCCCGTGT CGCTGGTGCA CTACAAGAAA GTGCTCGTCA CCAAGGGTGC GATCGACAAA
CTCAAGGAGA TGTTCGAATG A
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| Protein sequence | MQLELLNEQG QAASKFDAPE TVFGREFNED LVHQIVIAYR ANARQGTRAQ KDREQVRHTT
AKPFKQKGTG RARAGMSSSP LWRGGGRIFP NLPEENFTQK INKKMYRAGM VAILSQLARE
GRLAVVDSLK LESPKTKVLA DKFKAMNLES VMVIAEEVDE NLYLASRNLK NVFVVEPRYA
DPVSLVHYKK VLVTKGAIDK LKEMFE
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