| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0390 |
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| Symbol | rpsJ |
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| ID | 5745927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 433367 |
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| End bp | 433678 |
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| Gene Length | 312 bp |
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| Protein Length | 103 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641295453 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_001561421 |
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| Protein GI | 160895839 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000000705562 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCAAGC AAAAAATCCG CATCCGCCTG AAGGCGTTTG ACTACAAGCT GATCGACCAG
TCGGCTGCTG AAATCGTTGA CACTGCCAAG CGCACCGGCG CGATCGTCAA GGGTCCCGTG
CCCCTGCCGA CACGCATGAA GCGTTTCGAC ATCCTGCGCT CGCCGCACGT CAACAAGACC
AGCCGCGACC AGTTCGAAAT CCGCACGCAC CAGCGCCTGA TGGACATCGT TGACCCGACT
GACAAGACGG TTGACGCTCT GATGAAGCTG GACCTGCCCG CAGGCGTGGA CGTCGAGATC
AAGCTGCAAT AA
|
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| Protein sequence | MSKQKIRIRL KAFDYKLIDQ SAAEIVDTAK RTGAIVKGPV PLPTRMKRFD ILRSPHVNKT
SRDQFEIRTH QRLMDIVDPT DKTVDALMKL DLPAGVDVEI KLQ
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