| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0389 |
|---|
| Symbol | |
|---|
| ID | 5745926 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 432152 |
|---|
| End bp | 433342 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641295452 |
|---|
| Product | elongation factor Tu |
|---|
| Protein accession | YP_001561420 |
|---|
| Protein GI | 160895838 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0050] GTPases - translation elongation factors |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000100632 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 68 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAG AAAAATTCCA GCGGAACAAG CCGCACGTCA ACGTTGGCAC CATCGGTCAC
GTGGACCACG GCAAGACGAC CCTGACGGCT GCTATCGCTA CCGTTCTGTC CAAGAAGTTC
GGCGGCGAAG CCAAGGCTTA CGACCAGATC GACGCAGCAC CTGAAGAAAA GGCTCGCGGC
ATCACGATCA ACACCGCCCA CGTCGAGTAC GAAACGGCCG GTCGCCACTA CGCTCACGTT
GACTGCCCCG GCCACGCCGA CTACGTCAAG AACATGATCA CCGGCGCTGC TCAAATGGAC
GGCGCCATCC TGGTGTGCTC GGCCGCTGAC GGCCCCATGC CCCAGACCCG CGAGCACATC
CTGCTGGCCC GTCAGGTGGG CGTGCCCTAC ATCATCGTGT TCCTGAACAA GTGCGACATG
GTGGACGACG AAGAGCTGCT GGAACTGGTC GAAATGGAAG TGCGCGAGCT GCTTGCCAAG
TACGACTTCC CCGGCGACGA CACCCCCATC ATCCGCGGCT CGGCCAAGCT GGCCCTGGAA
GGCGACCAGT CCGACAAGGG CGAAGCTGCC ATCCTGCGCC TGGCTGAAGC ACTGGACTCC
TACATCCCCA CGCCCGAGCG CGCTGTGGAC GGTGCCTTCG CCATGCCCGT GGAAGACGTG
TTCTCGATCT CTGGCCGTGG CACCGTGGTG ACTGGCCGTA TCGAGCGCGG CATCATCAAG
GTCGGCGAAG AAATCGAAAT CGTCGGTATC CGCGACACCC AGAAGACCAT CGTCACCGGC
GTGGAAATGT TCCGCAAGCT GCTGGACCAA GGCCAGGCTG GCGACAACGT GGGTCTGCTG
CTGCGCGGCA CCAAGCGTGA AGACGTGGAA CGCGGCCAAG TGCTGTGCAA GCCCGGCTCC
ATCAAGCCCC ACACCCACTT CACGGCTGAG GTGTACGTGC TGTCCAAGGA CGAAGGTGGT
CGCCACACTC CGTTCTTCAA CAACTACCGT CCCCAGTTCT ATTTCCGCAC GACCGACGTG
ACCGGCTCCA TCGAGCTGCC CGCCGACAAG GAAATGGTGA TGCCTGGCGA CAACGTGTCG
ATCACCGTCA AGCTGATCGC CCCCATCGCC ATGGAAGAAG GTCTGCGCTT CGCCATCCGC
GAAGGTGGCC GTACCGTGGG CGCTGGCGTG GTTGCAAAGA TCATTGCGTA A
|
|---|
| Protein sequence | MAKEKFQRNK PHVNVGTIGH VDHGKTTLTA AIATVLSKKF GGEAKAYDQI DAAPEEKARG
ITINTAHVEY ETAGRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI
LLARQVGVPY IIVFLNKCDM VDDEELLELV EMEVRELLAK YDFPGDDTPI IRGSAKLALE
GDQSDKGEAA ILRLAEALDS YIPTPERAVD GAFAMPVEDV FSISGRGTVV TGRIERGIIK
VGEEIEIVGI RDTQKTIVTG VEMFRKLLDQ GQAGDNVGLL LRGTKREDVE RGQVLCKPGS
IKPHTHFTAE VYVLSKDEGG RHTPFFNNYR PQFYFRTTDV TGSIELPADK EMVMPGDNVS
ITVKLIAPIA MEEGLRFAIR EGGRTVGAGV VAKIIA
|
|---|
| |