Gene Daci_0384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0384 
Symbol 
ID5745921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp426653 
End bp427288 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content69% 
IMG OID641295447 
Productputative transmembrane protein 
Protein accessionYP_001561415 
Protein GI160895833 
COG category[R] General function prediction only 
COG ID[COG2945] Predicted hydrolase of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.114979 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATGCGC AGACCGAACG TTTGACCTTG ACCGGCCTTG CCGGGGCCGT GGAGGCCCTG 
CGCGATGCGC CGGCCGCCGA TGCACCGCCG CGCGGCGTGG CCATCATCGC CCACCCCCAT
CCGCTGTTCG GCGGCACCAT GGACAACAAG GTGGTGCAGA CCCTGGCGCG TGCCTTCGTG
CAGTGCGGCT ACACGGCCGT GCGATTCAAC TTCCGCGGCG TGGGCGCCAG TGCCGGCGAG
CACGACGCAG GCGTCGGCGA GGCCCAGGAC ATGCTGTCCG TGGTCCGCCA GGTCGCCCCC
GAAGGACCGA TTGCGCTGGC CGGCTTCTCC TTCGGAGCCT TCGTCACCAG CCATGTGCTG
GCGGGGCTCT GGAACGAGGG CCGGGTGGAA AAGGCGGTGC TGGTGGGAAC GGCGGCCAGC
CGTTTCACCG TGGCGCCTGT CCCGCCTGAG GCCCATGACC GGACCCTGGT GGTGCACGGC
GAAGCCGATG ACACGGTGCC GCTGTCTGCC GTCATGGACT GGGCGCGCCC GCAGATACTG
CCTGTTACCG TCGTGCCCGG GGGCGGTCAT TTCTTTCACG GACAATTGCC GCTGCTCAAA
AGCCTCGTGG TCCGCCATTT GCGCTCACTC CCCTAG
 
Protein sequence
MNAQTERLTL TGLAGAVEAL RDAPAADAPP RGVAIIAHPH PLFGGTMDNK VVQTLARAFV 
QCGYTAVRFN FRGVGASAGE HDAGVGEAQD MLSVVRQVAP EGPIALAGFS FGAFVTSHVL
AGLWNEGRVE KAVLVGTAAS RFTVAPVPPE AHDRTLVVHG EADDTVPLSA VMDWARPQIL
PVTVVPGGGH FFHGQLPLLK SLVVRHLRSL P