Gene Daci_0379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0379 
Symbol 
ID5745916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp422265 
End bp423458 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content69% 
IMG OID641295442 
ProductMg2 transporter protein CorA family protein 
Protein accessionYP_001561410 
Protein GI160895828 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCGG TGACGCCGCC CGCGGGAGCC GCTCCCGCCG CCAGGAACAT GCGCATCTTC 
CACCTGCAGC CGGGCGGCGC CACCGAGCTG GCCGCCCTGC CCGACCAGGC GCCCGCGCAG
GGATTCGTCT GGATCTCCTG CACCCGCGCC ACCTTGCAGG AGCGGCTGAC CGAGGTGCAG
CGCACGCTGC AGCTGCTGTC GGGCCAGCAG CTGGTGGACC TGCATGTCTC GGACCTGCTC
AACGCCCAGT TGCCCTCGCG CTACGACTAC ACCTCGCAGT ACGACCTGCT GGTGTTTCGC
CGCCTGGCCA GCGGGCAGGC GCGTGCTGCC GCTTCCACCG GCGTGCCGGC GGCCCCCACC
GCAGCGCCTG CAGCACCCGT GAAGCGCACA GGCCCGCCCG TGCTGCGCAA CATCGACACC
AGCCCCGTGG GCTTTGCCAT GTTCGATCAG GTGCTGCTGT CCGTGCACCC CGACGACTGC
ACCGTGCGCG ACGCCTATGC TGCGCGGCTG CTGGCCGCCG TGCCCAATGA CCCCCGCGAG
GGACGGCTGA ACCCCACCTC CGGCACGCGG CTGCCTGCCA GCCCGCCCGA CCTCATGCTG
CGCGTGGTCA ACCTCATCGT GGACGGCTTC CTGGACCTGC GCCGCGAACT GTCGCGCCAG
CTGGACCACT GGCAGACCGA GCTGCTGCGC CCGCGCACGC GCTTTGCCAA CTGGAGCGCG
CTATTGGACG CTCGGCTGGC CCTGCACGAG CTGGACGAGG TCTGCGAAGA CCAGCGCGCC
GCCGTTCAGG ACTGGACGGA CGCGCTGGAG ACCTGGGCGC CGCCTGAAGA TGCGGCGTCG
CTGCGCGAGC TGGACCTGCT CAAGGTGCGC AGCCGCGACG TGCTGGAACA CATAGAGCGC
GTGGTCCACC ACGTGCGGCG GCTGGAGCAG AGCACCGAGA CCGTGGTGCA GATGCATTTT
TCGGTGCAGA GCAACCGCAC CAACGACATC ATGCGCACGC TCACCGCGCT GACGGCCGTC
TTCCTGCCGC TGAACCTGAT TGCCGGCATC TTCGGCATGA ATTTCGAATT CATCCCCCTG
GTGCACAAGC AGGACGGCTT CTGGTGGGCC ATGGGCTCGA TGACGACGAT TGCCGTGGGC
CTGACCGTGT TCTTCTGGCG CAAGCGCTAC ATGGCGCGCA CGGCGCAGGA CTAG
 
Protein sequence
MQPVTPPAGA APAARNMRIF HLQPGGATEL AALPDQAPAQ GFVWISCTRA TLQERLTEVQ 
RTLQLLSGQQ LVDLHVSDLL NAQLPSRYDY TSQYDLLVFR RLASGQARAA ASTGVPAAPT
AAPAAPVKRT GPPVLRNIDT SPVGFAMFDQ VLLSVHPDDC TVRDAYAARL LAAVPNDPRE
GRLNPTSGTR LPASPPDLML RVVNLIVDGF LDLRRELSRQ LDHWQTELLR PRTRFANWSA
LLDARLALHE LDEVCEDQRA AVQDWTDALE TWAPPEDAAS LRELDLLKVR SRDVLEHIER
VVHHVRRLEQ STETVVQMHF SVQSNRTNDI MRTLTALTAV FLPLNLIAGI FGMNFEFIPL
VHKQDGFWWA MGSMTTIAVG LTVFFWRKRY MARTAQD