Gene Daci_0368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0368 
Symbol 
ID5745905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp410803 
End bp411471 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content73% 
IMG OID641295431 
Productputative lipoprotein 
Protein accessionYP_001561399 
Protein GI160895817 
COG category[R] General function prediction only 
COG ID[COG3218] ABC-type uncharacterized transport system, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTAT CTCGCAAGAC CGCCGTGGCC AGCGCTGGAC TGGCCGCCGC CCTGATCCTG 
CTGGCCGGCT GCTCGGCCCT GCCGCAGCCC CCCGCCCAGC CCGCGCGCTA TGACTTCGGC
CTGGCGCCGC TGTCCGCGCC CGCGCAGTCC GCCACATCCG CAGCCCCGCA GGCTCGCACG
CCGCTGGCGC TGGCCGATGT GGAGGCACCC GCCCTGTCCG ACGGCAGCAC GGCCATGTTC
TACCGCCTGG CCTATGCCAA CGGCCAGGAA CTGCGCCCCT ACCAGCTGGC GCGCTGGAGC
CAGCCTCCTG CACTGCTGCT GCAGCAGCGC CTGCGCAGCC AACTGGGCCT GCAGCGCCCC
GTGCTCGCCA GCAGCGAAAG CGTGGCCCAG CCGCGCCTGC AGGGTGCCGT GCCCACGCTG
CTGCGCGTGG ACATCGAAGA GTTCAGCCAG GTCTTCTACG CGCCCGGCTC CAGTGCCGGA
GTCGTGCGCC TGCGCGCCAC CCTGGTCGAG CAAAGCGGTG CCGTGGACCG CCTGCTGGGT
CAGAAGCTGT TCGAGGTGCG CAGTCCTGCC GCCTCCGGCG ATGCCGCAGG CGGCGCGAAG
GCGCTGGCGA CGGCGGCCGA TGCCGCCATT GCGCAGATCG ATGAGTGGCT GGGGCAGCAG
GGGCACTGA
 
Protein sequence
MPLSRKTAVA SAGLAAALIL LAGCSALPQP PAQPARYDFG LAPLSAPAQS ATSAAPQART 
PLALADVEAP ALSDGSTAMF YRLAYANGQE LRPYQLARWS QPPALLLQQR LRSQLGLQRP
VLASSESVAQ PRLQGAVPTL LRVDIEEFSQ VFYAPGSSAG VVRLRATLVE QSGAVDRLLG
QKLFEVRSPA ASGDAAGGAK ALATAADAAI AQIDEWLGQQ GH