Gene Daci_0362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0362 
Symbol 
ID5745899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp403596 
End bp404597 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content70% 
IMG OID641295425 
Productalcohol dehydrogenase 
Protein accessionYP_001561393 
Protein GI160895811 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAAT GGCAACTGCC CGCTCTGGGC CATGAAAACC TGCAGCTGGT GCAAGTACCC 
ATTCCCGAGC CCGGGCGGGG CCAGGTACTG GTGCGCGTGC ATGCGGCATC GCTGAACTAC
CGCGATCTGC TGATCCTGCG CGATGGCATG GGCATGGTGC CGACCCTGCC CCTGGTGCCC
GGCTCGGACA TGGCTGGCGA GGTGGTCGCC CTCGGCCCCG GCGTCTCGGA GTTCGCGGTT
GGCGACGCCG TGATCAGCAC CTTCTTCGCC GGCTGGCAGG ACGGCGTGCA GCCGCGCACC
AGCCTGCCGC TGGGCTCGCC CGGGCCGGGC ATGCTGTCGG AATACGTGGT GCTGGGCGAA
GACAACCTGG TCGCCGCGCC CCTTCGGCTG GACTTTGCGC AGGCCAGCAC CCTGACGTGC
GCGGGCGCAA CCGCCTGGTT CGCGCTGGCC GAGTCCGCGC CCACGCGGCC CGGCGACACC
GTGGTCATCA TGGGCACGGG CGGCGTGGCG CTGTTCGCCA TGCAGATTGC CCATGCCCAG
GGTGCGCGCG TGGTGGTGGT TTCGGGCAGC GACGACAAGC TGGCGCGGGC TGCGCAGCTG
GGTGCAGACC ACGGCATCCA CCGCCACCGC ACGCCCGACT GGGCCGCCGA AGTGCGCGCC
CTCACGGGAG GACGTGGCGC CGACCATGTG CTGGAACTGG CCGGGGGGGA TAACTTCGGC
CGCTCGCTAT CGGCCCTGGC ACAGGGCGGC CGCGTGTCGG TGATCGGCAA TCTGCAGGGC
GATGAGCTGC GCGGCTCGGT CTATCCGCTG CTGCTGGGGC GCGCCACCGT TCAGGGCATC
GGCGTGGCAC ACCGGCGTGC GCTGCAGGAT CTGGTGCGTG CCGTGGACTG GCTGAAGCTG
CAACCTGTGA TCGACAGCGA ATACGCGCTG GCCGATCTGC CGGCAGCCCT GGAGCATCTG
GAGCGGGGTG CTTTCGGCAA GCTGGTGCTG CGCATGCGCT GA
 
Protein sequence
MQQWQLPALG HENLQLVQVP IPEPGRGQVL VRVHAASLNY RDLLILRDGM GMVPTLPLVP 
GSDMAGEVVA LGPGVSEFAV GDAVISTFFA GWQDGVQPRT SLPLGSPGPG MLSEYVVLGE
DNLVAAPLRL DFAQASTLTC AGATAWFALA ESAPTRPGDT VVIMGTGGVA LFAMQIAHAQ
GARVVVVSGS DDKLARAAQL GADHGIHRHR TPDWAAEVRA LTGGRGADHV LELAGGDNFG
RSLSALAQGG RVSVIGNLQG DELRGSVYPL LLGRATVQGI GVAHRRALQD LVRAVDWLKL
QPVIDSEYAL ADLPAALEHL ERGAFGKLVL RMR