Gene Daci_0355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0355 
Symbol 
ID5745892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp396202 
End bp397272 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content69% 
IMG OID641295418 
Productrod shape-determining protein MreC 
Protein accessionYP_001561386 
Protein GI160895804 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCCA ATACCCTGGA CCACTCGGCG CCCTCGCTGT TCAAGCGGCG GCCCTCGCGG 
GTCTCGCAAC TGGCCCTGTA CAGCGCCCTG GCGCTGTTCC TGATGGTGGC CGACGCGCGT
TTCAGGATCA CCGATCCCGT GCGAGTGGCC GTGGCCACCG TGCTGTACCC CGTGCAATGG
GTGATGCTCA AGCCGGTGCA GGCCGTGCAC GACGCCAGCC GCTACCTGGG CTCGCTGGAC
GATGCCCAGG CCCGCGAACA GGCCGCGCGC AAGGAACTGG TGGCCATGGC CCAGCGTGCA
TCGCTGGCCG ACGAGCTGAT CCAGGAAAAC GACCACCTGC GCGAGCTGCT GCAACTGCGC
GATCGCCTCA CCACGCCCGG CACCGCTGCC GAGGTGGTCT ACGACAGCCC CGACCTCTAT
ACGCGCCGCG TGGTCATCGA CCGCGGCCAG GTGGATGGCA TCGACCAGGG CTCGCCCGTG
CTCGATGAAA AGGGCGTGGT CGGCCAGGTC ACGCGCGTGT ATCCGCTGCG TGCCGAGGTC
ACCCTGCTCA TCGACCGCGA CCAGGCCATT CCCGTCTTCA ATCCGCGCAC CGGCGCGCGC
AGCGTGGCCT ATGGCGATCC GTCGCCGCTG CGCACCGGCG GCATCGAGCT GCGCTTCATG
CCCAGCAATG CCGATGTTCA GGAAGGCGAC CTGCTGACCA CCAGCGGCGT CGATGGCCTG
TACCCGCCGG GCCTGCCCGT GGCCAAGGTG GTCTCGGTGG AGCGCCGCGC CGACTCGGCC
TTCTCGCGCA TCTACTGCGA GCCCGTGGGC CGCGTGCAGG GCGTGCGCCA CGTCGTGGTG
CTCAAGCCGC TGGACCGCGC CACCCACCCC GAGGCCGAAG GCGCCGCAGA ACCCCTGCGC
GCCGGCAAGG GCAAGGAAAA AGACAAGGGC AAGGAAAAAG ACAAGGCCAA GGACGGCAAG
GGCAAGGAAG CCTCCAAGGA CGGCAAGGCC GGCAAGACAG ATGCACCGGC CACGCCTGCC
GCACCTGCCG CTCCCGCCGC ACCCGCCTCC GCCAGGAAGG AGCCCGCATG A
 
Protein sequence
MNPNTLDHSA PSLFKRRPSR VSQLALYSAL ALFLMVADAR FRITDPVRVA VATVLYPVQW 
VMLKPVQAVH DASRYLGSLD DAQAREQAAR KELVAMAQRA SLADELIQEN DHLRELLQLR
DRLTTPGTAA EVVYDSPDLY TRRVVIDRGQ VDGIDQGSPV LDEKGVVGQV TRVYPLRAEV
TLLIDRDQAI PVFNPRTGAR SVAYGDPSPL RTGGIELRFM PSNADVQEGD LLTTSGVDGL
YPPGLPVAKV VSVERRADSA FSRIYCEPVG RVQGVRHVVV LKPLDRATHP EAEGAAEPLR
AGKGKEKDKG KEKDKAKDGK GKEASKDGKA GKTDAPATPA APAAPAAPAS ARKEPA