Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_0352 |
Symbol | gatA |
ID | 5745889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 392913 |
End bp | 394409 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641295415 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
Protein accession | YP_001561383 |
Protein GI | 160895801 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAGC AAACCACTGA TCTGCACACG CTCGGCGTGT CGGCCCTGTC GGCCCTGCTG CGCGAGCGCA AGCTCGGCGC CGTCGAAGCC GCCCAGCATT TCCTGGCCCG CGCCCAGGCG CACCAGAACC TGGGCGCCTT CGTCAGCATC GACGAAGAGG CCACCCTGGC CCAGGCCCGC GCTGCCGACG CCCTGATTGC CCAGGGCAAG GGCGGCCGCC TGGCTGGCGT GCCCATTGCG CACAAGGACA TCTTCGTCAC GCGCGACTTC CCGACCACGG CCTCCAGCAA GATGCTGGCC GGCTACCGCT CGCCCTTCGA CGCCACCGTG GTGACGCGCC TGGCCGAGGC CGGCGCCGTG ACGCTGGGCA AGCTCAACTG CGATGAATTC GCCATGGGCT CGGCCAACGA GAACTCGGCC ATCGCGCCCG TGGGCTTCGA CGCCCCCGCG CCCGTGCGCA ACCCCTGGAA CACGGACCGC GTGCCCGGCG GCTCCTCGGG CGGCTCGGCC GTGGCCGTGG CCGCCGGCCT GGCGCCCGCC GTCACCGGCA CCGACACGGG CGGCTCCATC CGCCAGCCCG CATCGTTTTG CGGCATCACG GGCATCAAGC CCACCTATGG CCGCGCCAGC CGCTACGGCA TGATCGCCTT CGCCTCCAGC CTGGACCAGG CCGGTCCCAT GGGCAAGAGC GCCGAGGACT GCGCCCTGCT GCTGTCCGAG ATGTGCGGCC CCGACCTGGA CCGCGACTCC ACCAGCCTGG ACGTGCCCGC AGAGGACTTC ACGGCCCGCC TGAACGACGG CATCGAAGGC CTGCGCATCG GCATCCCCGC CGAGTTCTTC GGCGAAGGCC TGTCGGCCGA CGTGCGCGCC GCCGTGGATG GCGCGCTCAA GGAATACGAG AAGCTGGGCG CCCGCCTGGT GCCCATCTCG CTGCCCCGCA CCGAGCTGTC GATTCCCGTG TACTACATCC TGGCCCCGGC CGAGGCATCG TCCAACCTGT CGCGCTTCGA TGGCGTGAAG TTCGGCCACC GCGCCAAGAA CTACACGGAC TTGGTGGACA TGTACAAGAA GACCCGTGCC GAAGGCTTCG GCGACGAGGT CAAGCGCCGC ATCATGATCG GCGCCTATGT GCTGTCCGAG GGCTACTACG ACGCCTACTA CCTGCAGGCG CAGAAGATCC GCCGCATGAT CGCCGACGAC TTCCAGGCCG CCTTCCAGCA GTGCGACGTG ATCGCCGGCC CCGCCGCGCC CACCGTGGCC TGGCAGCTGG GCGGAAAGAG CGACCCGCTG GCCAACTACC TGGCCGACAT CTTCACGCTG CCCGCATCGC TGGCCGGCCT GCCCGGCATG AGCGTGCCCG CAGGCTTTGG CGAGGCCGGC ATGCCCGTGG GCCTGCAGCT GATCGGCAAC TACTTCAAGG AAGGCCAGTT GCTCAACGCC GCCCACCGCT TCCAGCAGGC CACCGACTTT CACCTTCAAG CTCCGAAGGG CATCTGA
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Protein sequence | MTQQTTDLHT LGVSALSALL RERKLGAVEA AQHFLARAQA HQNLGAFVSI DEEATLAQAR AADALIAQGK GGRLAGVPIA HKDIFVTRDF PTTASSKMLA GYRSPFDATV VTRLAEAGAV TLGKLNCDEF AMGSANENSA IAPVGFDAPA PVRNPWNTDR VPGGSSGGSA VAVAAGLAPA VTGTDTGGSI RQPASFCGIT GIKPTYGRAS RYGMIAFASS LDQAGPMGKS AEDCALLLSE MCGPDLDRDS TSLDVPAEDF TARLNDGIEG LRIGIPAEFF GEGLSADVRA AVDGALKEYE KLGARLVPIS LPRTELSIPV YYILAPAEAS SNLSRFDGVK FGHRAKNYTD LVDMYKKTRA EGFGDEVKRR IMIGAYVLSE GYYDAYYLQA QKIRRMIADD FQAAFQQCDV IAGPAAPTVA WQLGGKSDPL ANYLADIFTL PASLAGLPGM SVPAGFGEAG MPVGLQLIGN YFKEGQLLNA AHRFQQATDF HLQAPKGI
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