Gene Daci_0352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0352 
SymbolgatA 
ID5745889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp392913 
End bp394409 
Gene Length1497 bp 
Protein Length498 aa 
Translation table11 
GC content69% 
IMG OID641295415 
Productaspartyl/glutamyl-tRNA amidotransferase subunit A 
Protein accessionYP_001561383 
Protein GI160895801 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID[TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGC AAACCACTGA TCTGCACACG CTCGGCGTGT CGGCCCTGTC GGCCCTGCTG 
CGCGAGCGCA AGCTCGGCGC CGTCGAAGCC GCCCAGCATT TCCTGGCCCG CGCCCAGGCG
CACCAGAACC TGGGCGCCTT CGTCAGCATC GACGAAGAGG CCACCCTGGC CCAGGCCCGC
GCTGCCGACG CCCTGATTGC CCAGGGCAAG GGCGGCCGCC TGGCTGGCGT GCCCATTGCG
CACAAGGACA TCTTCGTCAC GCGCGACTTC CCGACCACGG CCTCCAGCAA GATGCTGGCC
GGCTACCGCT CGCCCTTCGA CGCCACCGTG GTGACGCGCC TGGCCGAGGC CGGCGCCGTG
ACGCTGGGCA AGCTCAACTG CGATGAATTC GCCATGGGCT CGGCCAACGA GAACTCGGCC
ATCGCGCCCG TGGGCTTCGA CGCCCCCGCG CCCGTGCGCA ACCCCTGGAA CACGGACCGC
GTGCCCGGCG GCTCCTCGGG CGGCTCGGCC GTGGCCGTGG CCGCCGGCCT GGCGCCCGCC
GTCACCGGCA CCGACACGGG CGGCTCCATC CGCCAGCCCG CATCGTTTTG CGGCATCACG
GGCATCAAGC CCACCTATGG CCGCGCCAGC CGCTACGGCA TGATCGCCTT CGCCTCCAGC
CTGGACCAGG CCGGTCCCAT GGGCAAGAGC GCCGAGGACT GCGCCCTGCT GCTGTCCGAG
ATGTGCGGCC CCGACCTGGA CCGCGACTCC ACCAGCCTGG ACGTGCCCGC AGAGGACTTC
ACGGCCCGCC TGAACGACGG CATCGAAGGC CTGCGCATCG GCATCCCCGC CGAGTTCTTC
GGCGAAGGCC TGTCGGCCGA CGTGCGCGCC GCCGTGGATG GCGCGCTCAA GGAATACGAG
AAGCTGGGCG CCCGCCTGGT GCCCATCTCG CTGCCCCGCA CCGAGCTGTC GATTCCCGTG
TACTACATCC TGGCCCCGGC CGAGGCATCG TCCAACCTGT CGCGCTTCGA TGGCGTGAAG
TTCGGCCACC GCGCCAAGAA CTACACGGAC TTGGTGGACA TGTACAAGAA GACCCGTGCC
GAAGGCTTCG GCGACGAGGT CAAGCGCCGC ATCATGATCG GCGCCTATGT GCTGTCCGAG
GGCTACTACG ACGCCTACTA CCTGCAGGCG CAGAAGATCC GCCGCATGAT CGCCGACGAC
TTCCAGGCCG CCTTCCAGCA GTGCGACGTG ATCGCCGGCC CCGCCGCGCC CACCGTGGCC
TGGCAGCTGG GCGGAAAGAG CGACCCGCTG GCCAACTACC TGGCCGACAT CTTCACGCTG
CCCGCATCGC TGGCCGGCCT GCCCGGCATG AGCGTGCCCG CAGGCTTTGG CGAGGCCGGC
ATGCCCGTGG GCCTGCAGCT GATCGGCAAC TACTTCAAGG AAGGCCAGTT GCTCAACGCC
GCCCACCGCT TCCAGCAGGC CACCGACTTT CACCTTCAAG CTCCGAAGGG CATCTGA
 
Protein sequence
MTQQTTDLHT LGVSALSALL RERKLGAVEA AQHFLARAQA HQNLGAFVSI DEEATLAQAR 
AADALIAQGK GGRLAGVPIA HKDIFVTRDF PTTASSKMLA GYRSPFDATV VTRLAEAGAV
TLGKLNCDEF AMGSANENSA IAPVGFDAPA PVRNPWNTDR VPGGSSGGSA VAVAAGLAPA
VTGTDTGGSI RQPASFCGIT GIKPTYGRAS RYGMIAFASS LDQAGPMGKS AEDCALLLSE
MCGPDLDRDS TSLDVPAEDF TARLNDGIEG LRIGIPAEFF GEGLSADVRA AVDGALKEYE
KLGARLVPIS LPRTELSIPV YYILAPAEAS SNLSRFDGVK FGHRAKNYTD LVDMYKKTRA
EGFGDEVKRR IMIGAYVLSE GYYDAYYLQA QKIRRMIADD FQAAFQQCDV IAGPAAPTVA
WQLGGKSDPL ANYLADIFTL PASLAGLPGM SVPAGFGEAG MPVGLQLIGN YFKEGQLLNA
AHRFQQATDF HLQAPKGI