Gene Daci_0349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0349 
Symbol 
ID5745886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp389093 
End bp390316 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content70% 
IMG OID641295412 
Productbeta-lactamase 
Protein accessionYP_001561380 
Protein GI160895798 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA GCACCGACCG CCTGCACATC CCCGGCCTGC CCTGGGCCGA CTCCCCTGAA 
ACCGTGGGCC TGGGCAGCGC GCGCCTGGCG CGCCTGTCGG CCCGGCTGCA GCGCGGCGTG
GACACCGGCG AGATCCCGGG CGCCGTGGCC CTGGTGGCAC GGCGCGGCAA GCTGGCCTAC
CTGGAGAGCT TCGGCCTGCT GGACCCCGAG GCCGGCACGG CCATGCGGCC TGATGCCATC
TTCCGCATCG CCTCCATGAG CAAGCCCATC ACCTCGCTGG CCATCATGAT GCTGGCCGAG
CAGGGGCGGC TGTCCATCAT CGAGCCTGTG GAGCAGTACC TGCCCGAGCT GGCCGCGCTG
CGCGTGGGCC TGGAGCGCGC GCCGCTGGCG CGGCCCATCA CGCTGCAGGA CCTGCTGCGC
CACACCTCCG GCATTCCCTA TGGATTCGCC GGCACCGAAC ACCCCGTCAA GAAGATGTAC
CTGGATGCGG GCCTGTTCAG CGGCAAGTTC ACCAATGCGC AGTTCATCAC CAGGCTCGCG
CAGCTGCCGC TGGTGGCCCA GCCCGGCGAG ACCTGGGAAT ACGGCATGTC CACCGACGTG
CTGGGCCGCG TGGTCGAGGT GGTCAGCGGC CAGACGCTGG CCGCCTTCGT GCGCGAGCAC
ATCACCGGGC CGCTGGGCAT GGCCGACACG GGCTTTCATG CGCCCGACAG CGAGATCGCA
CGCGCCGCGC GGCCCCAGCC CGAAGGGCCG CAGAAACAGA TGCCGCCCAT CCCCCCGGTC
ACGCGCGCCA TGATGTTCGA GTCGGGCGGC GGCGGCATGG TCTCGACCAT GGCCGACTAT
GCGCGGCTGT GCCTGTTCTG GTGCAACGGC GGCACGCTGG ACGGCGTGCG CCTGGTCTCT
CGCAAGACCG TGGAGCTGAT GACCACCAAC CACCTGCCCG CCAGCGTGCG CATGGGACCG
GACATGGCGT ATTTCGGCGC CCAGCTGCCC TCGCCCGAGG TGGGCCAGGG CTTTGGCCTG
GGCTTTGCGG TGCGCACGGC GCCCGGCCTC AACCCGCTGC CGGGCAGCGT GGGCGATTTC
TCGTGGAGCG GCATCTACGG CACCTTCTTC TGGGTGGACC CGAAGGAGGA TTTGTTCGCC
ATCCTCATGA TGCAGTCCAT GGCCCAGCGC ATTCCCTACC GCTGGGTGAT GCGCGAGGGC
GTGTACCAGT CCGTGGTGGA CTGA
 
Protein sequence
MTASTDRLHI PGLPWADSPE TVGLGSARLA RLSARLQRGV DTGEIPGAVA LVARRGKLAY 
LESFGLLDPE AGTAMRPDAI FRIASMSKPI TSLAIMMLAE QGRLSIIEPV EQYLPELAAL
RVGLERAPLA RPITLQDLLR HTSGIPYGFA GTEHPVKKMY LDAGLFSGKF TNAQFITRLA
QLPLVAQPGE TWEYGMSTDV LGRVVEVVSG QTLAAFVREH ITGPLGMADT GFHAPDSEIA
RAARPQPEGP QKQMPPIPPV TRAMMFESGG GGMVSTMADY ARLCLFWCNG GTLDGVRLVS
RKTVELMTTN HLPASVRMGP DMAYFGAQLP SPEVGQGFGL GFAVRTAPGL NPLPGSVGDF
SWSGIYGTFF WVDPKEDLFA ILMMQSMAQR IPYRWVMREG VYQSVVD