Gene Daci_0338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0338 
Symbol 
ID5745875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp377259 
End bp378683 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content67% 
IMG OID641295401 
ProductNAD(P)(+) transhydrogenase (AB-specific) 
Protein accessionYP_001561369 
Protein GI160895787 
COG category[C] Energy production and conversion 
COG ID[COG1282] NAD/NADP transhydrogenase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGA ACCTCGTCAC GTTGCTCTAC CTGGTGGCCA GCGTCTGCTT CATCCAGGCG 
CTCAAGGGGC TGTCGCATCC CACCACCTCC ATACGCGGCA ACCTGTTCGG CATGGCCGGC
ATGGTGATCG CCGTGCTGAC CACGGCGGCG CTCATCGTGC AGCTGGCCGG CGGCAACGCT
CTGGGCCTGG GCTGGGTGCT GCTGGGCCTG CTGGTCGGCG GCACGGCCGG TGCCGTCATG
GCCCAGCGCG TGGAGATGAC CAAGATGCCC GAGCTGGTGG CCTTCATGCA CAGCATGATC
GGCCTGGCGG CGGTGTTCAT CGCCGTGGCC GCCGTGGCCG AGCCGTGGGC CTTTGCCATC
ACGGCCAAGG GCGGCGCCAT TCCGGGCGGC AACCGCGTGG AGCTGGCGCT GGGCGCCTTC
ATCGGCGCCG TGACCTTCAC GGGCTCGGTG ATCGCCTTCG GCAAGCTCAG CGGCAAGTAC
AAGTTCCGCC TGTTCCAGGG CGCGCCCGTG CAGTTCAAGG GCCAGCATGC GCTCAACGCC
GTGCTGGGGC TGGCAGCAGC CTTCTTCGTC TTCGGCTTCT GGCACAGCCA AAGCTGGATG
GACATCGTGC TGGTCATCGC CCTGGGCCTG CTGCTGGGCG TGCTGCTGAT CATTCCGATT
GGCGGCGCGG ACATGCCGGT GGTCGTGTCC ATGCTCAACA GCTACTCGGG CTGGGCGGCG
GCGGGCATCG GCTTCTCGCT GAACAACAGC ATGCTGATCA TTGCGGGTTC GCTGGTGGGC
AGCTCGGGCG CCATCCTGAG CTACATCATG TGCAAGGCCA TGAACCGCTC GTTCTTCAGC
GTGATCCTGG GCGGCTTCGG CGGCGAGGCC ACCAGCGCGG CGGCAGGCTC CCAGCAGCAG
CGCAACGTGA AAAGCGGCAG CGCCGACGAT GCGGCCTTCG TCCTGGGCAA TGCCGAGACC
GTGGTCATCG TGCCCGGCTA CGGCCTGGCC GTGGCGCGTG CCCAGCATGC GGTCAAGGAG
CTGGCCGACA AGCTCACCGA GCGCGGCGTG ACGGTGAAGT ACGCCATCCA CCCGGTGGCG
GGCCGCATGC CCGGCCACAT GAACGTGCTG CTGGCCGAGG CCGAGGTCCC CTACGACCAG
GTCTTCGAGA TGGAGGACAT CAACAGCGAG TTCGGCCAGG CCGACGTGGC CATCATCCTG
GGCGCCAACG ACGTGGTGAA CCCCGCCGCA CACGTCAAGG GCAGCCCCAT CTACGGCATG
CCCATCCTGG AGGCCTACAA GGCCAAGACG GTGATCGTCA ACAAGCGCTC CATGGCGGCC
GGCTATGCGG GCCTGGACAA CGAGCTTTTC TACATGGACA AGACCATGAT GGTCTTCGGC
GATGCCAAGA AGGTGGTGGA GGACATGGGC AAGGCGCTGG AGTGA
 
Protein sequence
MSMNLVTLLY LVASVCFIQA LKGLSHPTTS IRGNLFGMAG MVIAVLTTAA LIVQLAGGNA 
LGLGWVLLGL LVGGTAGAVM AQRVEMTKMP ELVAFMHSMI GLAAVFIAVA AVAEPWAFAI
TAKGGAIPGG NRVELALGAF IGAVTFTGSV IAFGKLSGKY KFRLFQGAPV QFKGQHALNA
VLGLAAAFFV FGFWHSQSWM DIVLVIALGL LLGVLLIIPI GGADMPVVVS MLNSYSGWAA
AGIGFSLNNS MLIIAGSLVG SSGAILSYIM CKAMNRSFFS VILGGFGGEA TSAAAGSQQQ
RNVKSGSADD AAFVLGNAET VVIVPGYGLA VARAQHAVKE LADKLTERGV TVKYAIHPVA
GRMPGHMNVL LAEAEVPYDQ VFEMEDINSE FGQADVAIIL GANDVVNPAA HVKGSPIYGM
PILEAYKAKT VIVNKRSMAA GYAGLDNELF YMDKTMMVFG DAKKVVEDMG KALE