Gene Daci_0336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0336 
Symbol 
ID5745873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp375801 
End bp376916 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content69% 
IMG OID641295399 
ProductNAD(P)(+) transhydrogenase (AB-specific) 
Protein accessionYP_001561367 
Protein GI160895785 
COG category[C] Energy production and conversion 
COG ID[COG3288] NAD/NADP transhydrogenase alpha subunit 
TIGRFAM ID[TIGR00561] NAD(P) transhydrogenase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGATTG GCGTGCCTGC CGAGACCATG GCAGGAGAAA CCCGGGTGGC TGCGACCCCC 
GAGACCGTCA AGAAGCTGCG TGCGCAAGGC CATGTGCTGC GCGTGCAGGC GGGGGCGGGA
GTGGCGGCCA GCGTGCCCGA TGCCTTGTAC GAGGCAGCGG GCGCGGAGAT CGTCGATGTG
GCAGGCGCCC TGGGCGCCGA CCTGGTGCTC AAGGTCCGTA TCCCTTCGGA GGACGAGTTG
CCCGGCATCC GCAAGGGCGC AACGCTGGTC GGCATGCTGG ACCCGTTCCA GCCCGCAGGC
CTGCAGCGCC TGGCCGACGC GGGAGTGACG GCCTATGCGC TGGAGGCGGC TCCGCGCACC
ACGCGTGCGC AGAGCATGGA CGTGCTGTCC AGCCAGGCCA ATATCGCCGG CTACAAGGCC
GTGATGATTG CGGCCAACCA GTACCAGCGC TTCTTTCCCA TGCTGATGAC GGCGGCCGGC
ACGGTGAAGG CCGCGCGCGT CGTGGTGCTG GGCGTGGGCG TGGCCGGCCT GCAGGCCATT
GCCACGGCCA AGCGCCTGGG CGCCGTGATC GAGGCCAGCG ATGTGCGGCC CAGCGTGCGC
GAACAGGTCG AATCCCTGGG CGGCAAGTTC ATCGACGTGC CCTACGAGAC CGCCGAGGAA
AAGGAGGCCG CCGAAGGCGT GGGCGGCTAC GCGCGCCCCA TGCCGCAAAG CTGGCTGGAC
CGCCAGAAGG CCGAGGTGGC CAAGCGCGTG GCCCAGGCCG ACGTGGTCAT CACCACGGCG
CTGATCCCGG GCCGGCCCGC TCCCGTGCTG GTCACGGCCG AGATGGTGCA GGCCATGAAG
CCCGGCGCCG TCATCGTGGA CCTGGCGGCA GAGCGCGGCG GCAACTGCCC GCTGACCCAG
GCCGGCATGA CCGTGGTCAC GCATGGCGTG ACCATCGTGG GACTGACCAA CCTGCCCGCC
ATGGTGGCGG CCGATGCCTC GGCCCTGTAT GCACGCAATG TGCTCGATTT TCTCAAGCTC
ATCATCAACA AGGATGGCGC CCTGCATGTG GACATGGAGG ACGACATCGT GGCCGCGTGC
CTGATGGCCC ATGAAGGCCA GCTGCGGAGG AAATGA
 
Protein sequence
MLIGVPAETM AGETRVAATP ETVKKLRAQG HVLRVQAGAG VAASVPDALY EAAGAEIVDV 
AGALGADLVL KVRIPSEDEL PGIRKGATLV GMLDPFQPAG LQRLADAGVT AYALEAAPRT
TRAQSMDVLS SQANIAGYKA VMIAANQYQR FFPMLMTAAG TVKAARVVVL GVGVAGLQAI
ATAKRLGAVI EASDVRPSVR EQVESLGGKF IDVPYETAEE KEAAEGVGGY ARPMPQSWLD
RQKAEVAKRV AQADVVITTA LIPGRPAPVL VTAEMVQAMK PGAVIVDLAA ERGGNCPLTQ
AGMTVVTHGV TIVGLTNLPA MVAADASALY ARNVLDFLKL IINKDGALHV DMEDDIVAAC
LMAHEGQLRR K