Gene Daci_0332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0332 
Symbol 
ID5745869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp372016 
End bp372933 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content70% 
IMG OID641295395 
Productpeptidase M48 Ste24p 
Protein accessionYP_001561363 
Protein GI160895781 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCAGG CATGCATGGC CGCTATACTT GGCGGCATGC AGCAGCCATC CCATCTCTCC 
TCCGAACCCT GTGCCCCGTC CGCCTGGGGC TGTGCCTGCG CGCCCTGGCG CGCGCGTCGC
GGTTTTCTGC TGGCCGGCAG CGCGGCGGCC ATGGGGCTGG CCACGGCGCC GGTGGCGGCA
CAGGTGCAGG TAGGCGGTGC CTCGGGCCTG CGCAAGCTGG TGCCGGCCGA GACGCTGGAA
GGCGCCGCCA CCGACCAGTA CCAGCAACTG CTGGCCAAGG CCCGCGCCCA GGGCGCGCTG
GCTGGCGACA GCAACCCGCA GCTGCAGCGG CTGCGCGCAA TCGCCCGGCG GCTGATTCCC
TACACCGCCC AATGGAACCC GCGTGCCAAT GCCTGGCGCT GGGAGGTGAA CCTGATCGGC
AGCAAGGAGA TCAACGCCTT TTGCATGCCG GGCGGCAAGA TCGCCTTCTA CACGGGCATC
ATCGACCAGC TGCAGCTGAC CGACGACGAG ATCGCCATGA TCATGGGCCA CGAAATGGCC
CATGCGCTGC GCGAACACTC GCGCGAGCAG CTGGCCAAGA ACCAGGCCAC CAGCATCGGC
ATCTCGCTGG GCGCCCAATT GCTGGGCCTG GGCGACCTGG GCAATGCGGC GGCCCGCCTG
GGTGGCCAGC TGCTGTCGCT GAAATTCAGC CGGGGCGACG AGAGTGAGGC CGACCTCGTG
GGCCTGGAAC TGGCCGCGCG CGCCGGCTAC AACCCCCAGG CCTCGGTCTC GCTGTGGCGC
AAGATGGGCC AGGCCACGGG CGACCGCGGC GGCCTGGAAT TCCTGTCCAC CCACCCCGCA
GGCCCCGAGC GCATCCGCGA ACTGGAGCGC AACATCCCGC GCGTGGAAGG CCTCTACGAG
GCCGCACGGC GCGGGTAG
 
Protein sequence
MFQACMAAIL GGMQQPSHLS SEPCAPSAWG CACAPWRARR GFLLAGSAAA MGLATAPVAA 
QVQVGGASGL RKLVPAETLE GAATDQYQQL LAKARAQGAL AGDSNPQLQR LRAIARRLIP
YTAQWNPRAN AWRWEVNLIG SKEINAFCMP GGKIAFYTGI IDQLQLTDDE IAMIMGHEMA
HALREHSREQ LAKNQATSIG ISLGAQLLGL GDLGNAAARL GGQLLSLKFS RGDESEADLV
GLELAARAGY NPQASVSLWR KMGQATGDRG GLEFLSTHPA GPERIRELER NIPRVEGLYE
AARRG