Gene Daci_0331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0331 
Symbol 
ID5745868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp370999 
End bp371970 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content71% 
IMG OID641295394 
Producthypothetical protein 
Protein accessionYP_001561362 
Protein GI160895780 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGCA ACTCTTCCGC CTCTTCCTCC GCCGTCGGCA TCGCCTTCGT CTCCGTGGCT 
GCCGTGCTCT GGGGCACGAC GGGCACGGCG CAAAGCCTGG GCGCGGGCGG GCTCTCGCCC
TTCTGGGTGG GCGCCGCGCA GCTGGCCGTC TCCAGCCTGT TTCTGGGGGC GCTGCTGGCG
GTTTCCCATT GGAGGCTGCG CGGGCGGGCC GGGCAGGGCG TGGCGCCCGT CCAGCCGCTG
CTGCCCAACC CTGTGCACCT GGGACTGCGC CCGGTCTGGT TCGTGCTGGC ATCCATGGGA
ATCGGCGGCT ACAGCGTCTT CTTCTACGAG GGCGTGACGC TCACGGGCGT GGCCGTGGGC
ACGGCCGTGG CCATTGGCAG CGGCCCCATC TGGGCCGGGC TGATGCAGGC GCTGGTGCTG
CGCGCGCCCC TGTCTGCCCT GTGGTGGGCC GGCACGCTGG TGAGCGTGGC GGGAGGTGCG
GCCATGGTGA TGGCAAGGGG CGGCGCCACG CTGTCCTGGA GCGGCCTGGC CCTGTGCCTG
CTGGCGGGGC TGTCGTACGC GGGCTATGCG CTGATCAACA AGCGCCTGGT CACCCACATG
TCGCCGCGCG TGGTGAATTT CTATGTCTTC ACCGGGGCGG CCTGCATGGC GGTGCCGATT
GCGCTGGTGC AAAGCGGCCT GCCGCAGTGG AGCCTGGCGG CCGTGCTGGT GGTGGTCTAC
CTGGGCGTGG TGGTGTCGGG CCTGGCGCAC ATGCTGTTTT CCATCGGGCT GCGCAGCATC
TCGGGCCCCA CGGGCGTGAC GCTGAGCCTG ATCGAGCCCG TGGCGGCCTT CGTGCTGGCG
GTGTGGGTCG TGGGCGAGCG GCAGCCGCTG CAATCGTGGC TGGGGCTGCT GGCCGTGCTG
GCGGGGCTGA TGCTGGTGAT TGGCGCCGAG ATGCGCTCGC AGCGGGCCGT GATGGCCGCG
CAGATGGCGT AA
 
Protein sequence
MARNSSASSS AVGIAFVSVA AVLWGTTGTA QSLGAGGLSP FWVGAAQLAV SSLFLGALLA 
VSHWRLRGRA GQGVAPVQPL LPNPVHLGLR PVWFVLASMG IGGYSVFFYE GVTLTGVAVG
TAVAIGSGPI WAGLMQALVL RAPLSALWWA GTLVSVAGGA AMVMARGGAT LSWSGLALCL
LAGLSYAGYA LINKRLVTHM SPRVVNFYVF TGAACMAVPI ALVQSGLPQW SLAAVLVVVY
LGVVVSGLAH MLFSIGLRSI SGPTGVTLSL IEPVAAFVLA VWVVGERQPL QSWLGLLAVL
AGLMLVIGAE MRSQRAVMAA QMA