Gene Daci_0329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0329 
Symbol 
ID5745866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp368741 
End bp370177 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content71% 
IMG OID641295392 
Productmajor facilitator transporter 
Protein accessionYP_001561360 
Protein GI160895778 
COG category 
COG ID 
TIGRFAM ID[TIGR00901] AmpG-related permease 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGCGC GCGCCAGTCC GCGCCACCAT GGGCCCGATA ATGGCCGCAG CCTGCCGCAG 
CCCAACATGA CCGAGCCGTC CACCACCACC TCCTCCGCCC CTTCCACCCC CACTGAAGCG
CCCCGCCGCA GCTGGGCCCA GACCCTGCGC GTCTATGCCG AGCCGGCCAG CCTGCGCATG
CTGGCCCTGG GTTTTTCGGC AGGCCTGCCG CTGCTGCTGG TGCTGGGCAC GCTGTCGTTC
TGGCTGCGCG AGGCCGGCGT GGACCGCACC ACCATCGGTT ACCTGAGCTG GGTGGGCCTG
GCCTATGCCT TCAAGTGGGT CTGGTCGCCG CTGGTGGACC GCATGCCGCT GCCGCTGCTC
ACGCGCTGGC TGGGGCGGCG GCGCGGCTGG CTGCTGTTCG CGCAGATGCT CATCGTCGCC
GGGCTGTGCG GCATGGCGTT CAATGATCCG CGCGTCTCGC TCACGCCGCT GGTGTGGTGC
GCGCTGGCCG TGGCCTTCGG CTCGGCCACG CAGGACATTG CGCTGGACGC CTACCGCATC
GAATCGGCCG ACACCGATCG CCAGGCCGCG CTGGCCGCCA CCTACCAGAC CGGCTACCGG
CTGGCCATGA TCTGGGCCGG CGCCGGCGTG CTGTGGCTGG CCGCCCGCGC CGAGGTGGCG
GGCACGGCGG GCTACCAGAG CGGCGCCTGG CAGGTGGCCT ACCTGGCCAT GGCTGCCTCC
ATGGCCGTGG GCATGCTGAC CGTGCTGCTC TCGCCGGAAC CGGTGCCACG CCCGCTGGCG
CCTGCCCGCA ACGCGGCCGA GTGGCTGCGT GGCGCGCTGG TCGAGCCCTT CGCCGACTTC
CTGGGCCGCT ACCGCTGGCA GGCGCTGCTG GTGCTGGGCC TGATCGCCAT CTACCGCATC
AGCGACGTGG TCATGGGCAT CATGGCCAAC CCCTTCTACG TGGACATGGG CTTCACCAAG
GACGAGGTGG CCGCCGTGAC CAAGGTATAC GGCGTGATCA TGACGCTGGC GGGCGCCTTC
CTGGGCGGGG CGCTGGCCAT GCGCTGGGGC GTGATGCGCG TGCTGATGCT GGGCGCCGCG
CTGTCGGCCG CCACCAACCT GCTGTTCGCC TGGCTGGCCA CGCGCGGCCA TGACGTGAAT
GCGCTGGTCT GGGTGGTGAG CGCGGACAAC CTGGCCGGCG GCATCGCCTC GGCGGCCTTC
ATCGCCTACC TGTCGGGGCT GACCAATGTG CAGTACTCGG CCACGCAGTA CGCGCTGTTC
AGCTCCATGA TGCTGCTGGC GCCCAAGTGG CTGGCCGGCT TCTCGGGCGC CTTTGTCGAT
GCGCATGGCT ACGTGAGCTT CTTCCAGGCC ACGGCCCTGC TGGGCCTGCC CGTGCTGGTG
CTGATCGCGC TGGCCTCGCG CGTGCACGCG GTGCGGCCCG CGCAACGCGG CAGTTGA
 
Protein sequence
MVARASPRHH GPDNGRSLPQ PNMTEPSTTT SSAPSTPTEA PRRSWAQTLR VYAEPASLRM 
LALGFSAGLP LLLVLGTLSF WLREAGVDRT TIGYLSWVGL AYAFKWVWSP LVDRMPLPLL
TRWLGRRRGW LLFAQMLIVA GLCGMAFNDP RVSLTPLVWC ALAVAFGSAT QDIALDAYRI
ESADTDRQAA LAATYQTGYR LAMIWAGAGV LWLAARAEVA GTAGYQSGAW QVAYLAMAAS
MAVGMLTVLL SPEPVPRPLA PARNAAEWLR GALVEPFADF LGRYRWQALL VLGLIAIYRI
SDVVMGIMAN PFYVDMGFTK DEVAAVTKVY GVIMTLAGAF LGGALAMRWG VMRVLMLGAA
LSAATNLLFA WLATRGHDVN ALVWVVSADN LAGGIASAAF IAYLSGLTNV QYSATQYALF
SSMMLLAPKW LAGFSGAFVD AHGYVSFFQA TALLGLPVLV LIALASRVHA VRPAQRGS