Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_0316 |
Symbol | |
ID | 5745853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 356439 |
End bp | 357377 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641295379 |
Product | branched-chain amino acid aminotransferase |
Protein accession | YP_001561347 |
Protein GI | 160895765 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | [TIGR01122] branched-chain amino acid aminotransferase, group I |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCCCG TTGTTCCCTC GATGGCCGAC CGTGACGGCA AGATCTGGAT GGATGGCCAG CTGGTGGACT GGCGCGATGC CAAGATCCAT GTGCTGACCC ACACGCTGCA CTACGGCTGC GGCGCATTCG AGGGCGTGCG GGCCTACAAG TCCGAACAGG GCACGGCCAT CTTCCGCCTG GAAGACCACA CCAAGCGCCT GTTCAACAGC GCCAAGATCC TGCGCATGCA GATCCCGTTC ACCCAGGAAG TGGTGAACCA GGCCCAGGTC GAGGTCGTGC GCGCCAACCA GCTGGAATCG TGCTACCTGC GTCCGCTGAC CTGGATCGGC GACCGCAAGC TGGGCGTCTC CCCCAAGGGC AACACCATCC ACCTGATGGT TGCAGCCTGG GCCTGGGGCG CCTACCTGGG CGAAGAAGGC ATGCAGCGCG GCATCCGCGT GAAGATCTCC AGCTTCACGC GCCACCATGT GAACATCACC ATGAGCCAGG CCAAGGCGGT GAGCAACTAC ACCAACTCCA TCCTGGCCAA CACCGAGGCG TTGGACGACG GCTATGACGA GGCCATCCTG CTGGACGCCT CGGGCTTCGT CTCCGAAGGC TCGGGCGAGA ACATCTTCGT CATCAAGGAC GGCGTGGTCT ACACGCCCGA CCTGTCGGCC GGCGCGCTCA ACGGCATCAC GCGCAACACC GTGATGCACA TCTGCAAGGA CCTGGGCCTG GAAGTGGTGC AAAAGCGCAT CACGCGCGAC GAGCTGTACA TCGCCGATGA AGTCTTCTTC ACCGGCACGG CCGCCGAAGT CACGCCCATC CGCGAGGTAG ACCGCATCGA GATCGGCGCG GGCAGCCGCG GCCCCCTCAC CGAAAAGATC CAGCAGGCCT TCTTTGACAT CGTCAACGGC CGCAACCCCA AGTACGCCCA TTGGCTGACT CGGGTCTGA
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Protein sequence | MSPVVPSMAD RDGKIWMDGQ LVDWRDAKIH VLTHTLHYGC GAFEGVRAYK SEQGTAIFRL EDHTKRLFNS AKILRMQIPF TQEVVNQAQV EVVRANQLES CYLRPLTWIG DRKLGVSPKG NTIHLMVAAW AWGAYLGEEG MQRGIRVKIS SFTRHHVNIT MSQAKAVSNY TNSILANTEA LDDGYDEAIL LDASGFVSEG SGENIFVIKD GVVYTPDLSA GALNGITRNT VMHICKDLGL EVVQKRITRD ELYIADEVFF TGTAAEVTPI REVDRIEIGA GSRGPLTEKI QQAFFDIVNG RNPKYAHWLT RV
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