| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0314 |
|---|
| Symbol | |
|---|
| ID | 5745851 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 354447 |
|---|
| End bp | 355877 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641295377 |
|---|
| Product | DNA repair protein RadA |
|---|
| Protein accession | YP_001561345 |
|---|
| Protein GI | 160895763 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1066] Predicted ATP-dependent serine protease |
|---|
| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGCCA GGGCGGCGGC CACCGCTCGG TATAGTGCTC ACCCCATGGC CAAAGACAAA
ACCACGTTCA TCTGCAATGC CTGCGGAGGC ACCAGCCCGC GCTGGCTGGG CAAGTGCCCG
GCCTGCGGGG CCTGGAACTC TCTGATCGAG GCCGTTGCCG AGCCTGCGAG CGCGGGCAAG
AACCGGCTCA GCCAGCCCCA GGGCTATGCG GGCCTGGCCA ATGTCCAGGC CGTGATGCCG
CTGTCGGCCA TCGAGGCCCA GGACGTGGCG CGCACGCCCA GCGGCATCGA GGAGCTGGAC
CGCGTGCTGG GCGGCGGCAT TGTCGAAGGC GGCGTGGTGC TGATTGGTGG CGATCCCGGC
ATCGGCAAGT CCACCCTGCT GCTGCAGGCC ATGGACGCGC TGCACCGCGT CGGCCTGCCC
ACGCTGTATG TCACGGGCGA GGAAAGCGGT GCCCAGGTCG CGCTGCGCTC GCGCCGCCTG
GGGCTGGAGG CCAGCCAGGT CAACGTGCTG GCCGAGATCC AGCTGGAGAA AATCCTCGCC
ACCATGGAGG CCACCCAGCC GGCCGTGGTC GTCATCGACT CCATACAGAC CGTGTACTCG
GACCAGCTGT CCTCGGCGCC GGGCTCGGTG GCCCAGGTGC GCGAATGCGC GGCCCACCTC
ACGCGCGCGG CCAAGACCAC GGGCATCACC GTGATCCTGG TCGGCCATGT GACCAAGGAA
GGCGCACTGG CCGGACCGCG CGTGCTGGAG CACATGGTGG ACACGGTGCT CTACTTCGAG
GGCGATACGC ACAGCAACTT CCGCCTGGTG CGCGCCATCA AGAACCGCTT TGGCGCCGTC
AACGAGATCG GCGTCTTCGC CATGACGGAG AAGGGCCTCA AGGGCGTGAC CAACCCCAGC
GCCATCTTCC TGTCCCAGCA CAGCGAGCCC GTGCCCGGCT CCTGCGTGCT GGTCACGCTG
GAGGGCACGC GCCCCATGCT GGTGGAGATA CAGGCCCTGG TCGATCAGGG CGGCCCCGCG
CCGCGTCGCC TGTCCGTGGG CCTGGACCGC GACCGGCTGG CCATGCTGCT GGCCGTGCTC
AGCCGCCACG CGGGCGTGGC CTGCGCGGAC CAGGATGTGT TCGTCAACGC CGTGGGCGGC
GTGCGCATCA GCGAGCCTGC GGCCGACCTG GCCGTCATGC TGTCCATCAC TTCCAGTCTG
CGTGGCCGCG CCCTGCCCAA GGGATTCCTC GCCTTTGGCG AAGTGGGCCT GGCCGGCGAA
GTGCGCCCCG CGCCGCGCGG CCAGGAGCGC CTGAAGGAAG CGGCCAAGCT GGGCTTCACC
ATGGCCGTGG TACCCAAGGC CAATGCGCCC AAGAAGGCCA TCGCTGGTCT GACCGTTCAT
GCCGTCGAAC GCGTGGACGA GGCCATGAAC ATCGTCCGAG GGATGGGCTG A
|
|---|
| Protein sequence | MRARAAATAR YSAHPMAKDK TTFICNACGG TSPRWLGKCP ACGAWNSLIE AVAEPASAGK
NRLSQPQGYA GLANVQAVMP LSAIEAQDVA RTPSGIEELD RVLGGGIVEG GVVLIGGDPG
IGKSTLLLQA MDALHRVGLP TLYVTGEESG AQVALRSRRL GLEASQVNVL AEIQLEKILA
TMEATQPAVV VIDSIQTVYS DQLSSAPGSV AQVRECAAHL TRAAKTTGIT VILVGHVTKE
GALAGPRVLE HMVDTVLYFE GDTHSNFRLV RAIKNRFGAV NEIGVFAMTE KGLKGVTNPS
AIFLSQHSEP VPGSCVLVTL EGTRPMLVEI QALVDQGGPA PRRLSVGLDR DRLAMLLAVL
SRHAGVACAD QDVFVNAVGG VRISEPAADL AVMLSITSSL RGRALPKGFL AFGEVGLAGE
VRPAPRGQER LKEAAKLGFT MAVVPKANAP KKAIAGLTVH AVERVDEAMN IVRGMG
|
|---|
| |