Gene Daci_0311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0311 
Symbol 
ID5745847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp351750 
End bp352853 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content70% 
IMG OID641295373 
Productalanine racemase 
Protein accessionYP_001561342 
Protein GI160895760 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0787] Alanine racemase 
TIGRFAM ID[TIGR00492] alanine racemase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGTC CCATTCTTGC CACCATCCAT TCCGCCGCGC TTCGCCACAA CCTGGAGCGG 
GTGCGGCAGG CGGTCCCCGA TGCCAAATTG TGGGCCGTGG TCAAAGCCAA CGCCTATGGC
CACGGTATCG AGAACGTGTT CGAGGCCCTG CGCGGCGCCG ACGGCTTCGC CATGCTGGAC
CTGGCCGAGG CCGAGCGTGT GCGCCAGCTG GGCTGGCGCG GCCCCATCCT GCTGCTGGAG
GGGGTCTTCG AGCCGCGCGA CCTGGAGCTG TGCTCGCGCC TGTCCATCTG GCATGCCGTG
CACTGCGACG CCCAGATCGA CTGGCTGGCC GCGCACAAGA CGCAGAACGG CCACCGCGTC
TTCCTCAAGA TGAACTCCGG CATGAACCGC CTGGGCTTCA CGCCCGAGCG ATACCGCGCG
GCCTGGGCCC GGCTGAACGC CTTGCCCCAG GTGGAGGAAA TCTCGTTCAT GACCCATTTC
AGCGATGCCG ACGCAGGGGC CGGACAGCCC GGAATCTCGG CACAGCTGCA GCGCTTTCAT
GACGCCACGC GCGACCTGCC CGGCGAGCGC AGCGTGGGCA ACAGCGCAGC CACGCTGCGC
CAGGGCGACG ACGCGCTGGT GCGCTGCGAC TGGGTGCGGC CGGGCATCGT GCTCTACGGC
AGCTCCCCCG ACTATCCGCA GCACACGGCG GCCCACTGGG ACCTGCAGCC CACGCAGACG
CTGAGCTCGC GCATCATCGG CGTGCAGCAA CTGACCGAGG GGCAGAGCGT GGGCTATGGA
TCGCGCTTCA CGGCCGAGGG CCCCCTGCGC CTGGGCACCG TGGCCTGCGG CTATGCCGAC
GGCTATCCAC GCCACTGCGG CACGGGCACG CCCGTGCTGG TGAACGGCGT GCGCACCCGC
ACCCTGGGCT GCGTGAGCAT GGACATGCTG GCCGTGGACC TGACGCCCGT GCCCGATGCC
GGCATGGGCA GCGAGGTCAC GCTGTGGGGC CGCGCCAGCA ACGGCGCCGT GCTGCCCATC
GACGAGGTGG CCGAGGCCGC AGGCACGCTG GGCTATGAAC TCATGTGCGC CGTCGCGCCG
CGCGTGAACA AGACCATCGA TTGA
 
Protein sequence
MPRPILATIH SAALRHNLER VRQAVPDAKL WAVVKANAYG HGIENVFEAL RGADGFAMLD 
LAEAERVRQL GWRGPILLLE GVFEPRDLEL CSRLSIWHAV HCDAQIDWLA AHKTQNGHRV
FLKMNSGMNR LGFTPERYRA AWARLNALPQ VEEISFMTHF SDADAGAGQP GISAQLQRFH
DATRDLPGER SVGNSAATLR QGDDALVRCD WVRPGIVLYG SSPDYPQHTA AHWDLQPTQT
LSSRIIGVQQ LTEGQSVGYG SRFTAEGPLR LGTVACGYAD GYPRHCGTGT PVLVNGVRTR
TLGCVSMDML AVDLTPVPDA GMGSEVTLWG RASNGAVLPI DEVAEAAGTL GYELMCAVAP
RVNKTID