Gene Daci_0307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0307 
Symbol 
ID5745843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp347514 
End bp348380 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content71% 
IMG OID641295369 
ProductProQ activator of osmoprotectant transporter ProP 
Protein accessionYP_001561338 
Protein GI160895756 
COG category[T] Signal transduction mechanisms 
COG ID[COG3109] Activator of osmoprotectant transporter ProP 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.406422 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGGG GTTTCGTTTT CTCCAAGCCC ACGTGCTCCG CCATGACTGA ATCCGTGTCT 
GAACCGCAAG AACAGAGCGC CGCGCTGCCG GCGGACGCCG CTGCCGGCAC CGAGCCGCAG
GCTGCAGCCA GCGCCGATGG CCAGGGCCGC AAGCGCTCGC GCCGTGGCGG ACGTGGCCGC
AACAAGGGCA AGGCCACCGA GCCTGCCGCC GATGCCGCAT CCGGCACGGC CGCCAGTGCC
GAGGCCAACG CTTCCAGGCC CGTGCGCACC CAGCACCCGC TGCTGGCGCA ACTGGCCCAA
TGGCATCCGA ACCTGTTCGG CGAGCAGCCG CTGCCGCTCA AGCGCGGCAT CTTCGAGGAC
CTGCTGGCCG CCCATCCTGA AGCCATTGAC CGCGACCAGC TCAAGCTGGC CCTGTCCCAG
CACACGCGCT CGAGCCGCTA CCTCACCGTG GTGGCCAGCG GCCAGGCCCG GCATGACCTG
CAGGGCCAGT CGGTCGAGGC CATGGCGCCC GAGCATGTGC ACCATGCGCT GATCGAAGTC
TTCCGCCGCC GTCAGCACCG CTCGCCCGAA GACCTGGCGC CCAAGCTGCG CAACCGCATC
ATCGCGGCCT ACGAGGCATC GGGCCTGTCG CGCGACGACT ACGCGGCGCG GGTGCAAGGC
CGTGACGAGG CCACCAACGC CCTGGTGGCC GAGGCACTGG CCGAGGCCGA TGCGCGCACC
GCACGCGACG AGGCGCTGCT GCGCGCCTTC GAGGCCAGCG GCCAGACCTC CGAAGCCGGC
TTTGCCGACA TGTACGGCAT GAACCCGCGC CAGGTGGCGC AGCAGCTGGA ACGCGCCCGC
CGCCGCCTGC AGACGCAGGC GGCCTGA
 
Protein sequence
MMRGFVFSKP TCSAMTESVS EPQEQSAALP ADAAAGTEPQ AAASADGQGR KRSRRGGRGR 
NKGKATEPAA DAASGTAASA EANASRPVRT QHPLLAQLAQ WHPNLFGEQP LPLKRGIFED
LLAAHPEAID RDQLKLALSQ HTRSSRYLTV VASGQARHDL QGQSVEAMAP EHVHHALIEV
FRRRQHRSPE DLAPKLRNRI IAAYEASGLS RDDYAARVQG RDEATNALVA EALAEADART
ARDEALLRAF EASGQTSEAG FADMYGMNPR QVAQQLERAR RRLQTQAA