Gene Daci_0305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0305 
Symbol 
ID5745841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp345335 
End bp346117 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content69% 
IMG OID641295367 
Producthypothetical protein 
Protein accessionYP_001561336 
Protein GI160895754 
COG category[S] Function unknown 
COG ID[COG3619] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATGC GCCACCACCT GCACCTGCTC ACGGACCGGC ACCGCACGGT GGCCAGCAAC 
CGCACGCTGG GCCTGCTGCT GGCCTTCAAC GCGGGTGCGG TGAATGCGGG CGGCTTTTTG
CTGGTGCACT CCTATACCTC GCACATGACG GGCTTTGTCT CGCTGCTGGC CGACAACCTC
GTGCTGGGCA ATACGGCGCT GGTGCTCAGT GCCTGCGGCG CGCTGCTGGC CTTTCTGTGC
GGCGCGGCCG CGACATCGCT GCTGGTCAAC TGGGCGCGCC ACCACCGGCT GCGCAGCAGC
TATGCGCTGC CGCTGCTGCT GGAAGCCGCG CTGATGCTGC TCTTCGGCGT GCTGGGCGCG
GCCATGCTGG CCTGGCCCAC GCCGTTCGCC GTGCCGCTGG CCGTGCTGCT GCTGTCCTTC
ATCATGGGAT TGCAGAACGC CACGGTGACC AAGATGTCGT CCTCGCAGAT CCGCACCACG
CACATGACGG GCGTGATCAC CGACCTGGGC ATGGAGCTGG GCCGAGCCCT TTACTGGAAC
CGCCATGGCA GCCCGCCCGA GCACCGGGTC CACGCCAACC ATGTGCGGCT GCGGCTGTTC
GCAGGGCTGC TGTCCATGTT CCTGCTGGGC GGCATTGCGG GTGCGCTGGG TTTCCGGCAC
CTGGGCTTTG TGTTCGTCGT GCCGCTGGCC GTGGTGCTGT GCCTGCTGTC CCTGCCGCCG
CTGTGGGCCG ACCGTGCGCG GCTGCCCCTG CTGCTGGGCC GGCGAGCCGC GCCTCGCGCG
TGA
 
Protein sequence
MRMRHHLHLL TDRHRTVASN RTLGLLLAFN AGAVNAGGFL LVHSYTSHMT GFVSLLADNL 
VLGNTALVLS ACGALLAFLC GAAATSLLVN WARHHRLRSS YALPLLLEAA LMLLFGVLGA
AMLAWPTPFA VPLAVLLLSF IMGLQNATVT KMSSSQIRTT HMTGVITDLG MELGRALYWN
RHGSPPEHRV HANHVRLRLF AGLLSMFLLG GIAGALGFRH LGFVFVVPLA VVLCLLSLPP
LWADRARLPL LLGRRAAPRA