Gene Daci_0290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0290 
Symbol 
ID5745826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp323988 
End bp325301 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content69% 
IMG OID641295352 
Productmajor facilitator transporter 
Protein accessionYP_001561321 
Protein GI160895739 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCTGCAA GGAAAGTCAT GAAAAAACTC CCCGCTCCCC TGCTCGCCAG GATCTCCTGG 
CGCCTGCTGC CCTTTTTGCT GCTCATGTAC ATCATGGCCT TCCTGGACCG GGCCAACGTG
GGCTTTGCCA AGGTGGCCTT CCAGGCCGAC ACCGGCATCA GCGATGCGGC CTTCGCCTTT
GGCGCGGGCG TGTTCTTCGC AGGCTATGCG CTGCTGGAAG TGCCCAGCAA CCTGATCATG
CACCGCGTGG GCGCACGCAT GTGGATGTGC CGGATCATGG TCACCTGGGG CCTGGTGTCG
GCGGCCATGA TGTTCGCCCA CGACCAGACC ACGTTCTACG TGCTGCGCTT TTTGCTGGGC
GTGGCCGAGG CGGGGTTCTT CCCCGGCGTC ATCCTGTACC TGACCTACTG GTTCCCGGCG
GCGCACCGCG CGCAGGCCAT GGGCTTTTTC TACTTCGGCG CGCCGCTGGC CTTCATCTTC
GGCAGCCCGC TGTCGGGCCT GCTGCTGGAG CTGGACGGCA TGGGTGGCTG GCACGGCTGG
CAGTGGCTGT TCGCGGTGGA GGGGCTGATG GCCGTGGCCG TGGGCATCTG GGCGTATTTC
CACCTGGACA ACCGCCCCGC CGACGCCACC TGGCTCAGCC GCGAGGACAA GGCGCTGCTG
CAGGACATCC TCGACAGCGA AGAGCGCGCC AAGGGCAGCC ACGGCCACAG CCTGCTGGCC
GCGCTGTGCC AGCCGCGCGT GCTCTACCTG GCGCTGATCT ACCTGCTGAT CCAGGCCAGC
GTCTATGGCG TGGTGTTCTA CCTGCCCAGC CAGGTGGCGG GCCTGCTGGG CACCAAGGTG
GGCCTGCTGG TGGGCGTGGT CTCGGCCATT CCCTGGCTGT GCGCGCTGCT GGCCGCCTGG
TGGATTCCGG GCCATGCCGA GCGAACAGGC CAGCCGCGCG GCATCGCCAG CCTGACGCTG
GTGATGGCTG CCGTGGGCAT GGCTGCATCG GTGAGTTTCT CCAGCCCCCT GCTGGGTGTG
GCCGCGCTGT GCCTGGCGGC GGCCGGCTTC ATCGCCGTGC AGCCCGTGTT CTGGACCTTT
CCCGCCAACA CGCTGGCCGG CGCTGCGGCC GCTGGCGGCA TCGCCTTCAT CAACTCCCTC
GGCGCCGTGG GCGGTTTCAT CGCCCCCATC GTCAAGAACT GGGCCGAGGG CTTTTTCCAC
TCCCCGGCGG CCGGCCTGTA CCTGCTGGCC GGCACCACGC TGCTGGCTGC GGCCCTGGTG
CTGGGCGTGC GCGCACGCCT GGCGCCGGCC TTGGCCGCAC CGTCGGCCGC CTGA
 
Protein sequence
MPARKVMKKL PAPLLARISW RLLPFLLLMY IMAFLDRANV GFAKVAFQAD TGISDAAFAF 
GAGVFFAGYA LLEVPSNLIM HRVGARMWMC RIMVTWGLVS AAMMFAHDQT TFYVLRFLLG
VAEAGFFPGV ILYLTYWFPA AHRAQAMGFF YFGAPLAFIF GSPLSGLLLE LDGMGGWHGW
QWLFAVEGLM AVAVGIWAYF HLDNRPADAT WLSREDKALL QDILDSEERA KGSHGHSLLA
ALCQPRVLYL ALIYLLIQAS VYGVVFYLPS QVAGLLGTKV GLLVGVVSAI PWLCALLAAW
WIPGHAERTG QPRGIASLTL VMAAVGMAAS VSFSSPLLGV AALCLAAAGF IAVQPVFWTF
PANTLAGAAA AGGIAFINSL GAVGGFIAPI VKNWAEGFFH SPAAGLYLLA GTTLLAAALV
LGVRARLAPA LAAPSAA