Gene Daci_0275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0275 
Symbol 
ID5745811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp306334 
End bp307014 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content68% 
IMG OID641295337 
Producthypothetical protein 
Protein accessionYP_001561306 
Protein GI160895724 
COG category[R] General function prediction only 
COG ID[COG5553] Predicted metal-dependent enzyme of the double-stranded beta helix superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGGAT TGTTGCGGGC CGGGCGCCTC ACTACAGTGG ACTTCAACGA CGACAAGGAG 
CCCCCTTTGA ACACCACCAC CACCACCAAC AACAACACCA TCACCGAACA GCGCAGCGCC
GCAGTGGCAG CAGCCATCGA CAGCATGAAG CAGGCCATTG GCGAGGACGC GGCCACGCGC
GCCAGCCTGG ACGCCGTGCT CCAGCAACTG CTGGGCCTGG CCGCGCGCCG CGACTTCTGG
CAGCAGGCCG ACTACGCCGC ACCCGAAGAG GGCGAGCACC AGGCGCGCTA CCTGATCGCC
GAGGACGCCG ACCAGAGCTA TGCGCTGTAC CTCAACGTCA TGCGCCCGGG CAAGCGCATC
GTGCCGCACA ACCACACGAC CTGGGCCTGC ATTGCCGCCG TGGAAGGCAC GGAGCACAAC
CGCGTCTACG AGCGCACCGA CGACGGCTCC GTCCCCGGCA AGGGCACGCT GCGCGAGACG
GAACTCGTGG TGGTGGCGCC AGGCCAGGGC ATCGCCCTCA TGCCCGAGGA CATCCACTCC
GTGGAGATCC AGGGCGATCA GGTCATCCGC CACCTGCACA TGTACGGCCG CGCGCTGGAG
ACGCTCAACG AGCGCACCAG CTACGACCTG GCCACCGGCA CCTGCCAGAC CATGGCCATC
GGCGTGCAGA CGCGCCGCTG A
 
Protein sequence
MRGLLRAGRL TTVDFNDDKE PPLNTTTTTN NNTITEQRSA AVAAAIDSMK QAIGEDAATR 
ASLDAVLQQL LGLAARRDFW QQADYAAPEE GEHQARYLIA EDADQSYALY LNVMRPGKRI
VPHNHTTWAC IAAVEGTEHN RVYERTDDGS VPGKGTLRET ELVVVAPGQG IALMPEDIHS
VEIQGDQVIR HLHMYGRALE TLNERTSYDL ATGTCQTMAI GVQTRR