Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_0272 |
Symbol | |
ID | 5745808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 303248 |
End bp | 304975 |
Gene Length | 1728 bp |
Protein Length | 575 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641295334 |
Product | PepSY-associated TM helix domain-containing protein |
Protein accession | YP_001561303 |
Protein GI | 160895721 |
COG category | [S] Function unknown |
COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGA ACACCACGGA CACCACGAAC ACGGCCGGCA AGCCCACCAA GCCCGCGAAA GCCGCCAAGC CCGGGAAAGC TGCCAAGGCG CCCGGCATCC GCCAGACCAT GTCCGACCTG CACACCTGGG TCGGCCTGCT GCTGGGCTGG TTCCTCTACG CCATGTTCCT CACGGGCACG GTGAGCTATT TCAGGAACGA GATCACGCAG TGGATGCAGC CCGAGCAGCC GCACCAGAGC CAGGCGAGCG AGCCCGCGCT CGTGGCCCAG CGTGTGGGTG ACGCCATGGC GCGCCTGGCA CCGCAAAGCC CTCGGTGGCT GATCAACCTG CCCGATGAAC GCAGCACGGT CGCCACGGTG TTCTGGAGCC CTCCCGAAGG CCAGGACAAG CGCCGCTTCG AGAACGGCCG CTTCGACCCG GCCACCGGCA CGCGCCTCGA AGGCCCGGTG CGCGAGACGC GTGGCGGCGA GTTCTTCTAC CGCTTCCACT TCCAGTTCCA CTACATGCCC GTGCTCTGGG GCCGCTATCT GGCGGGGCTG TGCGCCATGT TCATGCTGGT GGCCATCGTC AGCGGGGTGA TCACGCACAA GAAGATCTTT GCCGACTTCT TCACCTTCCG CTGGGGCAAG GGCCAGCGCT CCTGGCTGGA CGCGCACAAC GCGCTGTCGG TGCTGGGCCT GCCCTTTCAC CTGATGATCA CGTACACCGG GCTGGTGACC CTGGCCCTGA TGTACATGCC CTGGGCCAAT CTGGCCACGA CCATGACGCC CGAGCAACGC GTGGTGGCCG GCCAGCAGCT CAGCGCCTTT GTTCCCGCAG GCAAGCCCTC GGGCCAGGCC GCGCCCCTGG CACCGCTGGC CGACATGGTT CGCCAGGCCG AGCAGCGCTG GGGCGCGGGC CAGGTGGAAC GCCTGAACGT CAACCTGCCC GGCGATGCCA ATGCGCGCGT GACCGCCATC CGCGGCGAGA ACGGCCGCGT CTCCATCAGC CCGCAGTTCA TGATGTTCGA CGGCGTCAGC GGCCAGCTGC TGCAGGCACA GGACAGCGTG GGCGCCGCCG CCGAGACGCG CGGCGTGCTC TATGCGCTGC ACATGGGCCG CTTCGGCGAC CTGCCCACGC GCTGGCTGTA CTTCATCGTC AGCCTTGCGG GCACGGCCAT GGTGGGAACG GGACTGGTGC TGTGGAACGT GAAGCGGCGC AGCAAGCTGC CCGACCCGGA AAGGCCGCAT TTCGGGTTCC GGCTCGTGGA GCGGCTGAAC ATCGCCACCA TCGCCGGCCT GTCCATCGGC ATGGCCGGCA TGCTCTGGGC CAATCGCCTG CTGCCGGTGG AGATGGCGCA GCGCGCCGAG TGGGAGGTGC ACGCCATGTT CATCGCCTGG GGCGCCACCC TGTTCTGGGC ACTGGGCCGG CCCGCCAAGC GGGCCTGGAT CGAGTTGCTG TGGGCCGGCG CCGCCGCCCT GGCCCTGCTG CCCGTGGTCA ACGCGCTGAC CACGGATCGC GGCCTCTTGG CCAGCCTGCG CGCGGGCGAC TGGGTGTTCG CCGGCATGGA CCTCATGCTG CTGGCCCTGG CCGCACTGCA TGCCCATCTG GCCCTGCGCA CCCAGCGCCA CCAGCCCAAG GCCAAACCGG TGCGCGCCGC CCGGCCCGCG CCCAAGGCAG CCACTGCAGC AGCCGCCACG GCAGTGGCCG CCACGGCAGC GGCCGCCGCA GCGGAGACCA GCGCATGA
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Protein sequence | MSTNTTDTTN TAGKPTKPAK AAKPGKAAKA PGIRQTMSDL HTWVGLLLGW FLYAMFLTGT VSYFRNEITQ WMQPEQPHQS QASEPALVAQ RVGDAMARLA PQSPRWLINL PDERSTVATV FWSPPEGQDK RRFENGRFDP ATGTRLEGPV RETRGGEFFY RFHFQFHYMP VLWGRYLAGL CAMFMLVAIV SGVITHKKIF ADFFTFRWGK GQRSWLDAHN ALSVLGLPFH LMITYTGLVT LALMYMPWAN LATTMTPEQR VVAGQQLSAF VPAGKPSGQA APLAPLADMV RQAEQRWGAG QVERLNVNLP GDANARVTAI RGENGRVSIS PQFMMFDGVS GQLLQAQDSV GAAAETRGVL YALHMGRFGD LPTRWLYFIV SLAGTAMVGT GLVLWNVKRR SKLPDPERPH FGFRLVERLN IATIAGLSIG MAGMLWANRL LPVEMAQRAE WEVHAMFIAW GATLFWALGR PAKRAWIELL WAGAAALALL PVVNALTTDR GLLASLRAGD WVFAGMDLML LALAALHAHL ALRTQRHQPK AKPVRAARPA PKAATAAAAT AVAATAAAAA AETSA
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