Gene Daci_0263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0263 
Symbol 
ID5745799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp295770 
End bp296477 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content69% 
IMG OID641295325 
ProductABC transporter related 
Protein accessionYP_001561294 
Protein GI160895712 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAGT TTGAGAACGT GTCGCTGCGC TACGGCAGCT TCCTGGCGCT GGACGGGGTC 
AGCCTGCATG CCGACCGCGG CGAGCTGGTG GTGCTGCTGG GCGCCAACGG CGCGGGCAAG
AGTTCGCTGT TCCTCACGGC CAGCGGCATC CACAAGGCCG CTGGCGGCTC CATCGTCTGG
AATGGCAGGG AGCTGGCTGG CAGCAAGCCC TCGGCCATCG TGCAGTCCGG CGTGGTGCAG
TGCCCCGAGG GGCGCAAGCT GTTCCCCCAG ATGTCGGTGC TGCGCAACCT GCAGCTGGGC
GCCTACGTGC ACCGCCGCGA CCCCGGCCCC AGCCAGAAGA CGCTGCAGGA GGTGATGGAG
CTGTTTCCCA TCCTGCGCGA GAAGCAGCAC GACCCGGCCG GCTCGCTGTC GGGCGGCCAG
CAGCAGATGG TGGCCATCGG CCGCGCCATG ATGGGCCGGC CCCAGGCCCT GCTGCTGGAC
GAGCCCTCGC TGGGCCTGGC GCCCCTGGTC ATCAAGCAGA TGTTCGAGGC CATACAGCGC
ATCAACGCCG CTGGCACCAC CGTGCTGCTG GCCGAGCAGA ACGCCTATGC GGCGCTGAAG
ATCGCGCACC GCGCCTATGT GATGGAAAGC GGCCGCATCG TGCGCGAGGG CAAGCCGGCC
GAGCTGCTGG CCGACGACTC CATCCGCAAG GCGTACATCG GCGCATGA
 
Protein sequence
MLKFENVSLR YGSFLALDGV SLHADRGELV VLLGANGAGK SSLFLTASGI HKAAGGSIVW 
NGRELAGSKP SAIVQSGVVQ CPEGRKLFPQ MSVLRNLQLG AYVHRRDPGP SQKTLQEVME
LFPILREKQH DPAGSLSGGQ QQMVAIGRAM MGRPQALLLD EPSLGLAPLV IKQMFEAIQR
INAAGTTVLL AEQNAYAALK IAHRAYVMES GRIVREGKPA ELLADDSIRK AYIGA