Gene Daci_0262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0262 
Symbol 
ID5745798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp295019 
End bp295783 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content67% 
IMG OID641295324 
ProductABC transporter related 
Protein accessionYP_001561293 
Protein GI160895711 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAGA TTGACCACCT GACCAAGACC TTCGGCGGGC TGGCCGCCGT GAGCGATGTC 
AGCACCGTGA TCGAGGAAGG CCGCATCAAC GCCATCATCG GCCCCAACGG TGCGGGCAAG
ACCACGTTCT TCAACCTGAT CAGCTGCGTG CACAAGCCCA CCTCGGGCAC CATCACCTTC
AACGGCCAGG ACGTGACCTC GCTGCGCACC GACCAGGTGG CGAAACTGGG CGTGGCGCGC
ACCTTCCAGA CCACGGCGCT GTTCGACCGC GCCACGGTGC TGGACAACCT CATCGTGGGC
CACCGGCTGC GCACGCGCTC AGGCCTGTGG GACGTGCTGC GCGGCTCCAG CCGCCTGCGC
GAGGAAGAGC GCGTGTGCCG CGAAAAGGCG CGCGACGCGC TGGACTTCGT GGGCCTGTCG
CATGTGGCTG GCCGCATTGC GGGCGACATC ACGCAGGAGG AGCGCAAGCG CGTGGCCTTC
GCGCTGGCCC TGGCCACCGA CCCCAAGCTG ATGCTGCTCG ACGAGCCTGC CGGCGGCGTC
AACCCCGAGG AGACCGAGGG CCTGGCCGAG CTGATCCGCA AGCTGGTGCG CCACGGCATC
ACGGTGGCGC TGATCGAGCA CAAGATGGGC ATGATCATGA GCCTGGCCGA CAAGATCCTG
GTGCTCAGCT ACGGCGAGAA GATCGCCGAG GGCACGCCCG AGGAAATACG CCGCAACCCC
GCCGTCATCG ATGCCTACCT GGGGAGCGAG CATGCTGAAG TTTGA
 
Protein sequence
MLKIDHLTKT FGGLAAVSDV STVIEEGRIN AIIGPNGAGK TTFFNLISCV HKPTSGTITF 
NGQDVTSLRT DQVAKLGVAR TFQTTALFDR ATVLDNLIVG HRLRTRSGLW DVLRGSSRLR
EEERVCREKA RDALDFVGLS HVAGRIAGDI TQEERKRVAF ALALATDPKL MLLDEPAGGV
NPEETEGLAE LIRKLVRHGI TVALIEHKMG MIMSLADKIL VLSYGEKIAE GTPEEIRRNP
AVIDAYLGSE HAEV