Gene Daci_0260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0260 
Symbol 
ID5745796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp293194 
End bp294057 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content66% 
IMG OID641295322 
Productinner-membrane translocator 
Protein accessionYP_001561291 
Protein GI160895709 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTTT TTCTGCAGCA AGTGCTCAAC GGCCTGACCC TGGGCGGCAT CTACGGCCTG 
GTGGCCCTGG GCCTGACCCT GGTCTACGGC ATCCTGCACG TGCCCAATTT CGCGCACGGC
GGCTTCTACA TGATCGGCGC CTTCGTGGCC TTCCAGGCCA TGGTGGCCTG GAGCTGGGGC
TACTGGGCGG CCATGCTGAC CGCAGCCGTC GCGGTGGCGG TGCTGGGCAT CGTCAGCGAG
CGGTTGATCT TCCATCCGCT GCGCAAGGCC TCGCCCCTGC ATCCCAAGAT CGCCTCCATC
GGGCTGCTGC TGTTCCTGGA GGCGGGCGCT CAGGCGCTGT GGGGCGCGGA CTTCCAGCGC
ATGCCCACGC CCTACACCTC CATCGTGGAG ATGGGCGGCA TCACGGCGCC CGCGCAGCGC
CTGCTGATCA TCGGCGCGGC CTTTGCGCTG ATGGTGGCCC TGCACCTGTT CCTGACGCGC
ACCATCACGG GCGCGACCAT CATCGCCATG GCGCAGAACC GAGAAGGCGC ATCCATGGTG
GGCATCGACG CCAACCGCGT GTCCATGCTG ACCTTTGCCA TCTCGGGCGT GCTCGCGGCC
GTGGCGGCCA CGCTGTATGC GCCCATCAAC CTGGTCTATC CGGCCATGGG CCACCTGGTC
ATTACCAAGG CCTTCGTGAT CATCATCCTG GGCGGCATGG GCAGCATCCC GGGCGCCGTG
CTGGGCGGGC TGATCATCGG CTTTGCCGAG AGCTTCGGCG CCTACTACAT CTCCACCGAC
TACAAGGACA TCATCGCCTT CGTGCTGCTG GTGGTGATCC TGTCGCTGCG CCCGCAGGGC
CTGTTCGCCA AGAGGAGTCA TTGA
 
Protein sequence
MDVFLQQVLN GLTLGGIYGL VALGLTLVYG ILHVPNFAHG GFYMIGAFVA FQAMVAWSWG 
YWAAMLTAAV AVAVLGIVSE RLIFHPLRKA SPLHPKIASI GLLLFLEAGA QALWGADFQR
MPTPYTSIVE MGGITAPAQR LLIIGAAFAL MVALHLFLTR TITGATIIAM AQNREGASMV
GIDANRVSML TFAISGVLAA VAATLYAPIN LVYPAMGHLV ITKAFVIIIL GGMGSIPGAV
LGGLIIGFAE SFGAYYISTD YKDIIAFVLL VVILSLRPQG LFAKRSH