Gene Daci_0249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0249 
Symbol 
ID5745785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp280591 
End bp281577 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content72% 
IMG OID641295311 
ProductD-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 
Protein accessionYP_001561280 
Protein GI160895698 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.913314 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACCT CCCGTCCACG CGTTCTCCAG TTCGGCAAGA TGCCGCTGCC CCAGCTCGAT 
GCCGAGCTGG CCCAGGCCTA TGAGGTGACG CTGCTGTCCG AGCAGCCCGA CCGCGAGCGC
TTTCTCGCCG AGCACGGGGC GCAGTTCGAA TACCTGGTCA CCTCGGCCGC CATGGGCGTG
CCCGCGAGCG TGGTGCAGGC CCTGCCCAGG CTGCGCTTCG TGAGCAGCTT CGGCGTGGGC
TTTGACGCGC TGGACCGCGA GTCCCTGCTG CGCCAGGGCG CCCGCGTGGG CTACACGCCC
GGCGTGCTGG ACGACTGCGT GGCCGACATG GCCTTTGCGC TGCTGCTGGA TGCGGCGCGT
GGCCTGAGCG AGTCCGACCG CTTCGTGCGC CGGGGCGACT GGAGCCGAGG CCGCTTCGGC
ATCCGCACGC GCGCCAGCGG CAAGCGCCTG GGCATCTTCG GCATGGGCCG CATCGGCTCC
ACCGTGGCGC GCCGCGCGGC CGGTTTCGAC ATGGAGGTGG CCTATCACAA CCGCCGCCCG
GTCGAGGGAT CGCCACACCT CTACCAGCCC TCGCTGCTGG AGCTGGCGCG CTGGGCCGAC
TTCCTCGTCA TCACGGCCGC AGGCGGCGAC GGCACGCAGC ACCTGGTCAA CGCCGAGGTG
CTGGACGCGC TGGGGCCGCA GGGCTTTCTG ATCAACGTGG CACGCGGCAG CGTGGTCGAC
GAGGCCGCCC TGGTCCAGGC CCTGCAGCAG GGCCGCATCG CGGGCGCGGG CCTGGATGTG
TTCGAGGACG AGCCACGCCC CCATGCCGAG CTGCTGTCGC AGGACAACGT GGTGCTGGCG
CCCCACATCG CCAGCGGCAC GCACGAAACC CGCCGCGCCA TGGCCGACCT CGTGCTGCGC
AACCTGGCGC AGTTCATCGC CACGGGCCGG CCCGAGGCCG AGGTGCCATG GTCCGCCGCG
CAGCAGGCGG CCACCGCCGC CGCATAG
 
Protein sequence
MATSRPRVLQ FGKMPLPQLD AELAQAYEVT LLSEQPDRER FLAEHGAQFE YLVTSAAMGV 
PASVVQALPR LRFVSSFGVG FDALDRESLL RQGARVGYTP GVLDDCVADM AFALLLDAAR
GLSESDRFVR RGDWSRGRFG IRTRASGKRL GIFGMGRIGS TVARRAAGFD MEVAYHNRRP
VEGSPHLYQP SLLELARWAD FLVITAAGGD GTQHLVNAEV LDALGPQGFL INVARGSVVD
EAALVQALQQ GRIAGAGLDV FEDEPRPHAE LLSQDNVVLA PHIASGTHET RRAMADLVLR
NLAQFIATGR PEAEVPWSAA QQAATAAA