| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0248 |
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| Symbol | |
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| ID | 5745784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 279209 |
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| End bp | 280546 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641295310 |
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| Product | glucarate dehydratase |
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| Protein accession | YP_001561279 |
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| Protein GI | 160895697 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR03247] glucarate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCCA CCCCGACCAT CACCGAGATC GAAGTCATTC CCGTCGCCGG CCGCGACGGC
ATGCTCATGA ACCTCAGCGG CGCGCATGCG CCCTACTTCA CGCGCAACAT CGTGCTCATC
CACGACAGCG CGGGCCACAC CGGTGTGGGC GAGGTGCCTG GCGGCGAAGG CATACGCCAG
GCGCTGGAGG ACAGCAAGGC GCTGCTCATC GGCCAGTCCG TGGGCAACCA CCTCAAGCTG
CTGCAGAACC TGCAGCAGGC CCTGGCCGGG CGCGACACGG GTGGGCGCGG CCTGCAGACC
TTCGATCTGC GCATTGCCGT GCATGCCGTC ACCGCCGTGG AGTCGGCCCT GCTGGACCTG
CTGGGCCAGC ACCTGGGCGT GCCCGTGGCA GCCCTGCTGG GCGAAGGCCA GCAGCGCGAC
CGCGTGGAGA TGCTGGGCTA CCTGTTCTTC ACCGGCCCCA CCGACAAGAC CGACCTGCCC
TACGTCCAGC CCGGCGAAGA CCAAAGCGGC ACCGACGACT GGACGCAGGT GCGCCACATG
ACCGCCATGG ACCCGGCCGC CATCGTGCGC CAGGCCGAGG CGGCGCACGC GCGCTACGGC
TTCAACGACT TCAAGCTCAA GGGCGGCGTG CTGGCCGGCG AGCAGGAGGT GGAGGCCGTC
ACCGCGCTGG CCAGGCGCTT CCCGCAGGCG CGCGTCACGC TGGACCCCAA CGGTGGCTGG
CTGCTCAAGG ACGCCATCCG CCTCATGCGC GACATGCACG GCGTGCTCGC CTATGCCGAA
GATCCCTGCG GCGCCGAGAA CGGCTTCTCG GGCCGCGAAG TCATGGCCGA ATTCCGCCGC
GCCACCGGCC TGCCCACGGC CACCAACATG ATCGCCACCG ACTGGCGCCA GATGGTGCAT
GCGCTGTCGC TGCAGTCCGT GGACATCCCC CTTGCCGACC CGCATTTCTG GACCATGGCC
GGCTCCGTGC GCGTGGGCCA GACCTGCCGC GACTGGGGCC TGACCTGGGG CTCGCACTCC
AACAACCACT TCGACATCTC GCTGGCCATG TTCACCCACG TGGCCGCCGC CGTGCCCGGC
AAGGTCACGG CCATCGACAC GCACTGGATC TGGCAGGACG GCCAGTACCT CACCCAGAAC
CCGCTGCAGA TCAAGGGCGG CTTCGTCGAG GTGCCCAAGA CCCCGGGCCT GGGCGTCACC
GTGGACCGCG CCGCGCTGCA GCGCGCCAAC GCCCTGTACC TGGAGCACGG CCTGGGCGCG
CGCAATGACG CCATGGCCAT GCAGTACCTG ATTCCCGGCT GGACCTTCGA CAACAAGCGC
CCCTGCATGG TCCGCTGA
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| Protein sequence | MSSTPTITEI EVIPVAGRDG MLMNLSGAHA PYFTRNIVLI HDSAGHTGVG EVPGGEGIRQ
ALEDSKALLI GQSVGNHLKL LQNLQQALAG RDTGGRGLQT FDLRIAVHAV TAVESALLDL
LGQHLGVPVA ALLGEGQQRD RVEMLGYLFF TGPTDKTDLP YVQPGEDQSG TDDWTQVRHM
TAMDPAAIVR QAEAAHARYG FNDFKLKGGV LAGEQEVEAV TALARRFPQA RVTLDPNGGW
LLKDAIRLMR DMHGVLAYAE DPCGAENGFS GREVMAEFRR ATGLPTATNM IATDWRQMVH
ALSLQSVDIP LADPHFWTMA GSVRVGQTCR DWGLTWGSHS NNHFDISLAM FTHVAAAVPG
KVTAIDTHWI WQDGQYLTQN PLQIKGGFVE VPKTPGLGVT VDRAALQRAN ALYLEHGLGA
RNDAMAMQYL IPGWTFDNKR PCMVR
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