| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0242 |
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| Symbol | |
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| ID | 5745778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 273618 |
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| End bp | 274253 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641295304 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001561273 |
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| Protein GI | 160895691 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACCCA GAAAACGCCC TCCCTCGCGC TCCTTTGCGG GCCCATCCCG GCGCCTGCAG
ACCGCCTTCG CCGACAGGCC CGACACCGGC CCCTCACGCC TGCTGTGCTT CAACAAGCCC
TACGGCGTAC TCAGCCAGTT CACCCCCGAG GGCCGCTGGC GTGGCCTCAA GGAATACATC
GACGTGCCGG GCGTGCATGC GGCAGGCCGG CTCGACGCCG ACAGCGAAGG ACTGCTGCTG
CTGACCAATG ACGGCCCGCT GCAGGCGCGC ATCGCCGATC CGCGCTTCAA GATGGAGAAG
ACCTACTGGG TACAGGTCGA GGGCCTGCCC GACGAGGCCG CGCTGCAGGC CCTGCGCCAG
GGCGTGCAGC TCAACGACGG CATGACGCTG CCCGCGCAGG CGCGCCGGCT GGAGCCGCCG
CCCGTGCTGT GGCAGCGCGA CCCGCCCATC CGCGTGCGCC AGAACATTCC CGATTGCTGG
ATCGAACTGG TCATCCGCGA AGGCCGCAAC CGCCAGGTGC GCCGCATGAC GGCGGCCATT
GGCCACCCCA CGCTGCGGCT GGTGCGCGCA GCCATCGGGC CCTACACGCT GGACGGCCTG
GAGCCCGGCC AGTGGAAGGA CGTGGAGCCC GCCTAA
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| Protein sequence | MQPRKRPPSR SFAGPSRRLQ TAFADRPDTG PSRLLCFNKP YGVLSQFTPE GRWRGLKEYI
DVPGVHAAGR LDADSEGLLL LTNDGPLQAR IADPRFKMEK TYWVQVEGLP DEAALQALRQ
GVQLNDGMTL PAQARRLEPP PVLWQRDPPI RVRQNIPDCW IELVIREGRN RQVRRMTAAI
GHPTLRLVRA AIGPYTLDGL EPGQWKDVEP A
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