Gene Daci_0235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0235 
Symbol 
ID5745771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp265592 
End bp266950 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content67% 
IMG OID641295297 
Productglycerophosphoryl diester phosphodiesterase 
Protein accessionYP_001561266 
Protein GI160895684 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAC GTCCTATGTC CTTTTCCCGC ACTCCCCTGC TCGCGTCCCT GTGCGCGGCT 
GCAGTCCTCA CGGCCTGCGG CGGTGACGGC GGCTCGTTCT ACCTCACGCT CGACGGAAAG
CAGCCCCAGG TGATCGCCCA CCGCGGCTTC TCGGGCAAGT TCCCGGAGCA GACGCGCATG
GCCTACGAGG CCGCCGCCGA TGCAGGCGCG GACATGCTTG AACTCGACAT GCACATGACG
AAGGACTGCC AGCTGGTCGC CCGCCACAAC GCCTGGCTCA GCGACAGCAC CAACGTGGCC
GACGTGGCCA AGACCAATGC CGAAGTGGCA CGCCGCCAGC GCACTGCGGC CGGCGTGCTG
GTCAACGTGA AGTACCCGGC CATCCCAGCC AACGGCCCGG CCCAGTACCT GAGCGACCAG
TTGGACGCCA ACGATCCCAA GTCCGTGCTC AAGGCCCTGG TGGTCGATGG CGAGGACCAC
CGCAACGACT GGTCCATCAG CGACTTCACG CTGCAGGAGC TGCGCAGCTG GCTGACCGGC
ACCATCCTGG ACAACCGCAG CGAGCGCCCC ACCGAGTGGA ACGGCAAGCT GCCCCTGATC
AGCGCCCAGG ACGTGCTGGA CATCGCCGCC GCCAAGAGCA AGGCCCTGGG CCGCACCATC
CCCGTCTACG CCGAGACCAA GAACCCCTAC TGGAACAACC AGCAGGCGAT CGCCAACGGC
TGCGGCGCGC CCGGTTCGCG CCCGTTTGAA GACGCGGTGA TCAAGCTGCT GGACCAGAAC
AAGCTCAACG CCAAGGATTC GCCCATCTAC ATCCAGAGCT TCGACCCGGC CAGCCTCAAG
TACCTGCGCC AGGCCGGCAT GAAGGCCAAG GGCGTGCAGC TGATCGACGG CAACGACTTC
AGCCTGCGCG ACGGCTCCAT GGTCTACATC ACCAACGATG AGTGGACCTT CATCAGCGGC
CGCCCCTACA GCTGGACCCT GGCCGGCGAC GCCCGCACCT TCGCCGCCAT GCTCACGCCC
GCAGGCCTGG CCGACATCAA GACCTATGCC GACGGCATCG GCCCCTGGAA GCCCCAGGTC
CTGGCCCACT CCGTCGTGCC CTACAAGGAC GGCGCCGGCC TCAAGGACGT GAACACCGTC
AAGGACACGG GCCTGATCCG CGACGCCCAC AAGGCCGGCC TGATCGTGCA CAGCTTCACC
TTCCGCAACG AGCCGGGCCG CCTGGCCGGC CTGTACAAGG GCGACCCCGT GCAGGAATAC
CTGACCTACT ACCGCCTGGG CATCGACGGC GTGTTCACCG ACTTCACGGA CACGGCCGTT
GCGGCGCGCA AGGCGTACAA CAAGGAAATC GGGCTCTGA
 
Protein sequence
MTQRPMSFSR TPLLASLCAA AVLTACGGDG GSFYLTLDGK QPQVIAHRGF SGKFPEQTRM 
AYEAAADAGA DMLELDMHMT KDCQLVARHN AWLSDSTNVA DVAKTNAEVA RRQRTAAGVL
VNVKYPAIPA NGPAQYLSDQ LDANDPKSVL KALVVDGEDH RNDWSISDFT LQELRSWLTG
TILDNRSERP TEWNGKLPLI SAQDVLDIAA AKSKALGRTI PVYAETKNPY WNNQQAIANG
CGAPGSRPFE DAVIKLLDQN KLNAKDSPIY IQSFDPASLK YLRQAGMKAK GVQLIDGNDF
SLRDGSMVYI TNDEWTFISG RPYSWTLAGD ARTFAAMLTP AGLADIKTYA DGIGPWKPQV
LAHSVVPYKD GAGLKDVNTV KDTGLIRDAH KAGLIVHSFT FRNEPGRLAG LYKGDPVQEY
LTYYRLGIDG VFTDFTDTAV AARKAYNKEI GL