Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_0229 |
Symbol | |
ID | 5745765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 258649 |
End bp | 259377 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641295291 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_001561260 |
Protein GI | 160895678 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTATC AATTCGACTT CGGCGCCGTG TTCGACTACA GCGGCCTGCT GGCACAGGGC GCAGGCTTCA CGCTGGCGCT GACGGCGGCG GGCGCCGTGC TGGGCGGCGC CATCGGCGTG GCCGGCGGCG TCAGCCGCGC CTGGCGCATT GCGCCGCTGC ACTGGCTGTT CAAGGTGTAC GTGGAGGGCA TACGCAACAC GCCCTTCCTG GTGCAGCTGA TGTTCGTGTT CTTCGGCCTG CCTTCGCTGG GCGTGCAGAT CAACGAATGG CAGGCCTGCC TGCTGACCAC GGTGATCAAC CTGGGCGCCT ACATCACAGA GATCGTGCGC GCCGGCATCC AGGAGACGCA GCGCGGCCAG CTGGAAGCCG CTGGCGCGCT GGGCATGGGC CGCTGGGCGC TCTTCCGCCA TGTGGTGCTG CGCCCTGCGC TGCAGCGGGT CTGGCCCTCG CTGAGCAGCC AGATCGTGAT CGTGATGCTG GGCACCTCGG TGGTCTCGCA GATCGCCGCC CAGGACCTGA CGTTTGCGGC CAACTTCATC CAGTCGCGCA ACTTCCGCGC GTTCGAGACC TACCTGGTGG TGACGGCGGC GTACTTCGTG TTGGCCCTGG CACTGCGCCA GTTGCTGGCC TGGATAGGCC AGCGCTTCGT GGTGGGCCGC CGCACGCCAC GTGCAGCCCG GCCCGCTGCA CCCGCTGCAC CTGCGACCAC TGCCGGAGAC GCCGCATGA
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Protein sequence | MAYQFDFGAV FDYSGLLAQG AGFTLALTAA GAVLGGAIGV AGGVSRAWRI APLHWLFKVY VEGIRNTPFL VQLMFVFFGL PSLGVQINEW QACLLTTVIN LGAYITEIVR AGIQETQRGQ LEAAGALGMG RWALFRHVVL RPALQRVWPS LSSQIVIVML GTSVVSQIAA QDLTFAANFI QSRNFRAFET YLVVTAAYFV LALALRQLLA WIGQRFVVGR RTPRAARPAA PAAPATTAGD AA
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