Gene Daci_0226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0226 
Symbol 
ID5745762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp256836 
End bp257195 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content73% 
IMG OID641295288 
ProductFmdB family regulatory protein 
Protein accessionYP_001561257 
Protein GI160895675 
COG category 
COG ID 
TIGRFAM ID[TIGR02605] putative regulatory protein, FmdB family 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACCT ATGACTACCA CTGCACCGCA TGCGGCGGCT TCGACGCGCT GCGCAGCCTC 
TCGCAGCGCA ACGAGCCCGC GCCCTGCCCC AGCTGCGAGG CGGCCTCGCC CCGCGTCTTC
GTCAGCGCGC CGCGCCTGGC CTGCACCAGC CCCGAACAGC GCCGCGCCCA TGACACCAAC
GAGCGCGCCC GGCACGAGCC CAGGCGCTCA CGCGATGTGG CCGAGGGCAG CTACGCGCGC
ATGCGCCACC CTTCGGGCTG CGGCTGCTGC AGCGGCGCCA GCAAGCGCGG CTCCACGGTC
ACGGCGCCCA ACGGCGCCAA GACCTTCCCG ACCAAGCGGC CCTGGATGAT CAGCCACTGA
 
Protein sequence
MPTYDYHCTA CGGFDALRSL SQRNEPAPCP SCEAASPRVF VSAPRLACTS PEQRRAHDTN 
ERARHEPRRS RDVAEGSYAR MRHPSGCGCC SGASKRGSTV TAPNGAKTFP TKRPWMISH