Gene Daci_0225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0225 
Symbol 
ID5745761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp255560 
End bp256789 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content66% 
IMG OID641295287 
Productformamidase 
Protein accessionYP_001561256 
Protein GI160895674 
COG category[C] Energy production and conversion 
COG ID[COG2421] Predicted acetamidase/formamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAA CCCTGATCAA GGTCGATCTC AACCAGTCCC CCTACGACAA CCCGCAGGTG 
CACAACCGCT GGCATCCCGA CATCCCCATG GCGGTCTGGG TGGAGCCGGG CGCGGAGTTC
AAGCTGGAGA CCTATGACTG GACCGGCGGC GCCATCAAGA ACGACGACAG CGCCGAAGAC
GTGCGCGACG TGGACCTGTC CACCGTCCAC TTCCTGTCCG GCCCCGTGGG CGTCAAGGGC
GCCGAGCCCG GCGACCTGCT GGTGGTGGAC CTGCTGGACA TCGGCGCGCG CGACGACAGC
CTCTGGGGCT TCAACGGCTT TTTCTCCAAG CAAAATGGCG GCGGCTTCCT GGACGAGCAT
TTCCCGCTGG CCCAGAAGTC CATCTGGGAC TTCCACGGCA TGTTCACCAA GAGCCGCCAC
ATCCCCGGCG TCAACTTCGC AGGCCTCATC CACCCGGGCC TGATCGGCTG CCTGCCCGAC
CCCAAGATGC TGGCCAGCTG GAACGAGCGC GAGACCGGCC TCATCGCCAC CGACCCCGAC
CGCATTCCCG GCCTGGCCAA CCCGCCCAAC GCCACCACCG CCCACATGGG CCAGATGCAG
GGCGAGGCCC GCGACAAGGC CGCCGCCGAA GGCGCACGCA CCGTGCCGCC GCGCGAGCAC
GGCGGCAACT GCGACATCAA GGACCTCTCG CGCGGCTCGC GCGTGTTCTT CCCCGTCTAC
GTGGACGGCG CGGGCCTGAG CGTGGGCGAC CTGCACTTCA GCCAGGGCGA TGGCGAGATC
ACCTTCTGCG GCGCCATCGA GATGGCCGGC TGGGTGCACA TGAAGGTCTC GCTGATCAAG
GGCGGCATGG CCAAGTACGG CATCAAGAAC CCCATCTTCA AGCCCAGCCC CATGACGCCC
AACTACAAGG ACTACCTGAT CTTCGAAGGC ATCTCGGTGG ACGAAAAGGG CAAGCAGCAC
TACCTGGACG TGACCGTGGC CTACCGCCAG GCCTGCCTGA ACGCCATCGA GTACCTGAAG
AAATTCGGCT ACAGCGGCGC CCAGGCCTAC TCGCTGCTGG GCACGGCGCC CGTGCAGGGC
CACATCAGCG GCGTGGTGGA CGTGCCCAAT GCCTGCGCCA CGCTGTGGCT GCCCACGGAG
ATCTTCGACT TCGACATCAA TCCCACGGCC GAGGGACCAC AGAAGATCAT CACGGGCGGG
GTGGATCTGC CCATCGCCCA GGACAAGTAA
 
Protein sequence
MAETLIKVDL NQSPYDNPQV HNRWHPDIPM AVWVEPGAEF KLETYDWTGG AIKNDDSAED 
VRDVDLSTVH FLSGPVGVKG AEPGDLLVVD LLDIGARDDS LWGFNGFFSK QNGGGFLDEH
FPLAQKSIWD FHGMFTKSRH IPGVNFAGLI HPGLIGCLPD PKMLASWNER ETGLIATDPD
RIPGLANPPN ATTAHMGQMQ GEARDKAAAE GARTVPPREH GGNCDIKDLS RGSRVFFPVY
VDGAGLSVGD LHFSQGDGEI TFCGAIEMAG WVHMKVSLIK GGMAKYGIKN PIFKPSPMTP
NYKDYLIFEG ISVDEKGKQH YLDVTVAYRQ ACLNAIEYLK KFGYSGAQAY SLLGTAPVQG
HISGVVDVPN ACATLWLPTE IFDFDINPTA EGPQKIITGG VDLPIAQDK