| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0222 |
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| Symbol | |
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| ID | 5745758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 252860 |
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| End bp | 254050 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641295284 |
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| Product | urea ABC transporter, permease protein UrtC |
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| Protein accession | YP_001561253 |
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| Protein GI | 160895671 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCCC TCAAAGCCTG GATACAGCGC TACCAGCTCG CCAGCCTGGT GCTGCTCACC
GTCCTGCTGG CGGTGGTGCT GCCCCTGGCG CTGGACATCT TCCGCCTCAA CCTGGTCGGC
AAGTACCTGA CCTATGCCTT CGTCGCCATC GGCCTGGTCA TGGTCTGGGG CTATGGCGGC
GTGCTCAGCC TGGGCCAGGG CGTGTTCTTC GGCCTGGGCG GCTACGCCAT GGCCATGTTC
CTGAAGCTGG AGGCGTCCGA CCCCATCAGC ACCAAGATCC AGTCCACGCC CGGCATCCCC
GACTTCATGG ACTGGAACCA GCTGACCGAG CTGCCCTCGT TCTGGCTGCC CTTCAAGAGC
CTGCCGTTCT CGCTGGCCGC CGTCATCGCC GTGCCCACGC TGCTGGCCTG GCTCATCAGC
TTCGCCATGT TCAAGCGCCG CGTGGGCGGG GTGTACTTCG CCATCATCAC GCAGGCCGTG
GCGCTGATCG TCACCGTGCT CATCATCGGC CAGCAGGGCT ACACGGGCGG CGTCAACGGC
ATGACCGACC TCAAGACCCT GTGGGGCTGG GACACGCGCA CGGACAGCGC CAAGTACATC
CTCTACTACG TCTGCGTGGC CCTGCTGATC GGCGCCATCG TGCTGTGCCG CTGGATACAG
ACGGGCAAGG TGGGCACCCT GCTGCTGGCC ATGCGCGACA AGGAAGACCG CGTGCGCTTT
TCCGGCTACG ACGTGGCCAA CTTCAAGGTC TTCGTGTTCT GCCTGGCCGC TGCGCTGTCG
GGCATAGGCG GCGCCATGTT CACGCTGCAG GTGGGCTTCA TGTCGCCCAG CTTCGTGGGT
ATCGTGCCCT CCATCGAGAT GGTCATCTAC GCCGCCGTGG GCGGGCGCAT GAGCCTGGTG
GGCGCCGTGT ACGGCACGCT GCTGGTCAAC GCGGGCAAGA CCTATTTCTC GGAGAGCTTC
CCGGACCTGT GGCTGTTCCT CATGGCGGGC CTGTTCATCG GCGTGACCAT GGCCTTCCCG
ATGGGGCTGG CCGGCCTGTG GGAAAGCCGC ATCGTTCCGT GGTGGAACAG CCGCCGCAAG
GGCACGGCAC CTGCCGCAGC GCAGGGAGCC CAGGCAGCAC CTGCCCCGGC CCCGGCCGCC
ACCAAGCCCA CGTCCGCCCT GTCCGAAGGC ATGGGCCGCC AGGGCGCCTG A
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| Protein sequence | MQALKAWIQR YQLASLVLLT VLLAVVLPLA LDIFRLNLVG KYLTYAFVAI GLVMVWGYGG
VLSLGQGVFF GLGGYAMAMF LKLEASDPIS TKIQSTPGIP DFMDWNQLTE LPSFWLPFKS
LPFSLAAVIA VPTLLAWLIS FAMFKRRVGG VYFAIITQAV ALIVTVLIIG QQGYTGGVNG
MTDLKTLWGW DTRTDSAKYI LYYVCVALLI GAIVLCRWIQ TGKVGTLLLA MRDKEDRVRF
SGYDVANFKV FVFCLAAALS GIGGAMFTLQ VGFMSPSFVG IVPSIEMVIY AAVGGRMSLV
GAVYGTLLVN AGKTYFSESF PDLWLFLMAG LFIGVTMAFP MGLAGLWESR IVPWWNSRRK
GTAPAAAQGA QAAPAPAPAA TKPTSALSEG MGRQGA
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