Gene Daci_0217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0217 
Symbol 
ID5745753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp245304 
End bp245798 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content66% 
IMG OID641295279 
Producttransmembrane pair domain-containing protein 
Protein accessionYP_001561248 
Protein GI160895666 
COG category[S] Function unknown 
COG ID[COG4125] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTGC AGACACACAA AAAGGGCCTC CAGGGGCCCA AGCGCAAAGT GGTCTTCGTG 
ACCCTGTATG AACTGATCGC CATCGCGGCC TCCAGCCTGC TGTTCATGGC CATCGGCCAG
AGCGCCGGGC ATTCGGGCGG CATGGCGATT GCCGCCTCCA CGCTGGCCAT CGTCTGGAAC
CTGACCTTCA ACCACCTGTT CGAGCAATGG GAGGCGCGCC AGAGCGTCAA GGGCCGCTCG
GTGATGCGCC GCGTGGTGCA CGCCCTGGGC TTCGAGGGCG GGCTGGCCAT GGTGCTGATC
CCGCTGATGG CCTGGTGGTT CGGCGTCACG CTGTGGGAGG CCACGGTGAT GGAGGCTGGC
CTGCTGGTCT TCTTCCTGGT CTACACCTAT GTCTTCAACT GGTGCTTCGA CCATGTGTTC
GGCCTGCCGG CCTCGGCCTC GGCGTCCGCT GCGGTGGCCC CGCGTGCTCA GGGCGAGCCG
GCCTGCAGCA ACTGA
 
Protein sequence
MTLQTHKKGL QGPKRKVVFV TLYELIAIAA SSLLFMAIGQ SAGHSGGMAI AASTLAIVWN 
LTFNHLFEQW EARQSVKGRS VMRRVVHALG FEGGLAMVLI PLMAWWFGVT LWEATVMEAG
LLVFFLVYTY VFNWCFDHVF GLPASASASA AVAPRAQGEP ACSN