Gene Daci_0213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0213 
Symbol 
ID5745749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp241205 
End bp242077 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content67% 
IMG OID641295275 
Producthypothetical protein 
Protein accessionYP_001561244 
Protein GI160895662 
COG category[S] Function unknown 
COG ID[COG2326] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCCT TCAACCCTTT CTCCAGCCGC GATGCGGCCG TGCAAAAGCT CTGGGAGCAG 
TGGCAGCCGC GCTCCGCCAA GTCCGACAAG GACAAGCCGA TCGCCCTGGC CGACTTCGAC
CCGGGCGCCA AGCCCTTTTC CAACGGCAAC GGCAAGACCG AGGACAAGGC CGCCGTCGAG
GCCCTGGCCG AAGAGATCGA CGCGCTGCAG AACCTGCTGT ACGCCGACCG CCGCTACAAG
CTGCTGGTCG TGCTGCAGGG CACGGACACG GCGGGCAAGG ACGGCACCAT CCGTGGCGTC
TTCGGCCGCA CCAGCGCCCT GGGCGTGAAC GCCGTGGGCT GGAAGGCGCC AACCGATGCG
GAGCGCGCGC ACGACTACCT GTGGCGCATC CACCAGCGCG TGCCGGGCGC AGGCGAGATC
ACGGTCTTCA ACCGCAGCCA CTATGAGGAT GTGCTGGTGC CCGTGGTCAA CGGCTGGATC
ACGCCCGAGC AGCAGCGCCA GCGCTTTGCC CACATCAACG ACTTCGAGCG CATGCTCAGC
GAGACGGGCA CCGTGGTCGT CAAGTTCCTG CTGCACATCA GCGCCGACGA GCAGCGCGCG
CGCCTGCAGG AGCGCCTGGA CGACCCGGCC AAGCACTGGA AGTTCGACGA GAACGACATG
AAGGTGCGCA CGCAGTGGAA GGACTACCAG CAGGCCTACG GCCAGCTGCT GGGCGCCACG
CACACGCCCT GGGCGCCCTG GACCATCGTG CCCGCGGATT CCAAGACGCA CCGCAACCTC
ATGATCGCCA CCTTGCTGCG CGAGGTGATG CGCAACCTGG ACCTGCGCTT TCCCGAGGGC
GATCCGGCCC TCAAGGACTA CAAGATCACC TGA
 
Protein sequence
MDAFNPFSSR DAAVQKLWEQ WQPRSAKSDK DKPIALADFD PGAKPFSNGN GKTEDKAAVE 
ALAEEIDALQ NLLYADRRYK LLVVLQGTDT AGKDGTIRGV FGRTSALGVN AVGWKAPTDA
ERAHDYLWRI HQRVPGAGEI TVFNRSHYED VLVPVVNGWI TPEQQRQRFA HINDFERMLS
ETGTVVVKFL LHISADEQRA RLQERLDDPA KHWKFDENDM KVRTQWKDYQ QAYGQLLGAT
HTPWAPWTIV PADSKTHRNL MIATLLREVM RNLDLRFPEG DPALKDYKIT