Gene Daci_0190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0190 
Symbol 
ID5745726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp216889 
End bp217908 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content71% 
IMG OID641295252 
Productalcohol dehydrogenase 
Protein accessionYP_001561221 
Protein GI160895639 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCCC TGGTCTGCCA TCAATTCGGC GCGCCGCACG AGGTGGTCAG CCTGCAGTCC 
ATGGACCGGC CCGGCCAGCC CCTGGGCGCG CACCAGGCGC GGATTGCCGT GGCCTACGCC
AACGTCAGCC ACGCCACGGG CCTGCTGATC GAGGGCCGCT ACCAGCGGCG CCCGCCGCTG
CCCTTCGTGC CCGGCACCGA AGGCGTGGGG CGCGTGCTGG AATGCGGCAG CGCGGTGCAG
CACCTGCAGC CCGGCGATGC CGTGGCCTTC ATTGCCGACT GGGGTGCCTT TGCGCAGGAG
ACGGTGGTGC ATGCATCCAC CGTCTACCGC CTGCCTGCGG GCACGCCCTG GCTGCAGGCC
CTGCCCATTC CCCTGTCCTA CGGCACGGCC TACACGGCCC TGCACTGGCG CGCGCGCCTG
CAGGAAGGCG ATGTGGTGCT GGTGCTGGGC GCCGGGTCCG GCGTGGGCGC CGCGGCGGTG
GAAGTGGCCC GGCAGACGCC CGGCGTGCAG GTCATCGCCT GCGCCAGCAC CGAGGCCAAG
CGCGCCGATG CGCTGCGCCG TGGCGCGCAC CAGGCAGTCA CCCCGCAGGA CCTGGCCGCC
CAGGTCAAGC AGGCAACCCA GGGCCGGGGC GCCTCCCTGG TCTTCGACCC CGTGGGGGGC
GATCTCTTGC TGCAGGCACT GCGCGCGGCC GCGCAGAACG CGCAACTGCT GAGCGTGGGC
TTTGCCAGCG GCGCCATTCC CGCCGTGCCC ATGAACCTGG CCCTGGTCAA GAACCTCACG
CTGCACGGCT TCTTCTACGG CCGCTACATC GGCTGGACGC CGGCCGATGA GCGCCAGGCC
TTCGCGGCGC AGCTGCAGCC CGTCATTGCC ACGCTGCTCG ACTGGGCTGC CCGGGGATGC
ATCCATCCCC AGGTCAGCCA GGTCTATGAA ATGCATGAAC TGCCGGCTGC GCTGGATGCG
CTGCACGGCC GCAACGTGAC CGGCAAGCTC GCACTCGCCA TTCAAGGAGA CAAGGTATGA
 
Protein sequence
MQALVCHQFG APHEVVSLQS MDRPGQPLGA HQARIAVAYA NVSHATGLLI EGRYQRRPPL 
PFVPGTEGVG RVLECGSAVQ HLQPGDAVAF IADWGAFAQE TVVHASTVYR LPAGTPWLQA
LPIPLSYGTA YTALHWRARL QEGDVVLVLG AGSGVGAAAV EVARQTPGVQ VIACASTEAK
RADALRRGAH QAVTPQDLAA QVKQATQGRG ASLVFDPVGG DLLLQALRAA AQNAQLLSVG
FASGAIPAVP MNLALVKNLT LHGFFYGRYI GWTPADERQA FAAQLQPVIA TLLDWAARGC
IHPQVSQVYE MHELPAALDA LHGRNVTGKL ALAIQGDKV