Gene Daci_0187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0187 
Symbol 
ID5745723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp213360 
End bp214358 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content69% 
IMG OID641295249 
Producthypothetical protein 
Protein accessionYP_001561218 
Protein GI160895636 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCC AACACCGCCG CAAGGCCCTG GCCACCCTGG CCCATGCCCC GCTTCTGGCG 
TCCCTGGTGG CCGCCCTAGC CACCCTCCCC GCCGCCGCGC AGGACGCGCA GCCCGTGCGC
CTCATCGTGG GCTACTCGGC CGGCGGCCCC GTGGACCAGG GCGCCCGCCT GCTCAGCGTG
GCGCTGACCA AGGAGCTGGG CGCCTCGGTG GTGGTGGAGA ACAAGCCCGG CGCCAACGCC
ACCATGGCCG GCAGCGAGGT CGTGCGCGCC AGGCCCGATG GCCTCACGCT GTGGTTCGCG
GCCAGCCCCA CCATCACCAT CAGCCCCAAC GTGATGAGCA AGATGTCCTT CGACCCGGCC
CGTGACCTCA CGCCCGTGGC GCCCGTGCTC AGCTACTACA ACGTGCTGGT GGTCAACAAC
AACGAGCCCT ACAAGACCAC GGCCGAGCTC GTGGCCTATG CCAAGGCCCA TCCGCAAAAG
CTCAACTACG GCTCGGCCGG CGTGGGCGGC TCCAACCACC TGGGCGCGCT GCTGTTCGCG
CGGCGCAGCG GCATCGAGAT GAACCACATC CCCTACAAGG GCAACGCACC GGCCATGACC
GACGTGATCG GCGGCCAGCT GAGCATGATG CTGGACATCA TCAGCACCGC CAGCACCTAC
ATCCAGAGCG GCAAGGTGCG CGCCGTGGCC GTGACCTCGC CGCAGCGCAA TGCCTCGCTG
CCCGATGTGC CCACCTTTGC CGAGTCCGGC ATCGAAGGCC TCAAGGGCTT CGACGTGGGC
GGCTGGTATG GCGTCTACGG CCCCAAGGGC ATGTCGCCCG AACTCGTGGC CCGCCTGAAC
AAGTCCATCA ACGCCGCCCT GGCCCAGCCG GAGCTGCGCA AGCGCCTCAA GGAACTGGGC
TACGAAGAGT GGACCGGCGC CCCCCAGAAA CTGGCCGAGC GCGGTGCCAA GGAGCGCGCG
ATGTGGGCCA CCGTCACGCA AGGCATTGTG GTGGACTGA
 
Protein sequence
MPAQHRRKAL ATLAHAPLLA SLVAALATLP AAAQDAQPVR LIVGYSAGGP VDQGARLLSV 
ALTKELGASV VVENKPGANA TMAGSEVVRA RPDGLTLWFA ASPTITISPN VMSKMSFDPA
RDLTPVAPVL SYYNVLVVNN NEPYKTTAEL VAYAKAHPQK LNYGSAGVGG SNHLGALLFA
RRSGIEMNHI PYKGNAPAMT DVIGGQLSMM LDIISTASTY IQSGKVRAVA VTSPQRNASL
PDVPTFAESG IEGLKGFDVG GWYGVYGPKG MSPELVARLN KSINAALAQP ELRKRLKELG
YEEWTGAPQK LAERGAKERA MWATVTQGIV VD