Gene Daci_0181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0181 
Symbol 
ID5745717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp205290 
End bp206315 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content70% 
IMG OID641295243 
Producthypothetical protein 
Protein accessionYP_001561212 
Protein GI160895630 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCCGT CTTCCCTCCC ATCCTCTTGC CCGTCTTCCT TTTCGTCGCA GCGCCGCCGC 
CTGCTGTCCG CCGGCGGCGC GCTGGCTGCC AGCAGCCTGC TTCCCGCAGC CCGGGTGGCC
CATGCGGCCG ATGCCTGGCC CACGCGGCCC GTGCGCTTCA TCGTGCCCTT TCCGCCCGGC
GGTCCCGTGG ACACCACGGC GCGCGCCTTC ACCCAGAAGC TGGGCGAGAT CTGGCAGCAG
CCCAACCTGG TGGACAACCG TGCGGGCGCC GGCGGCATGG TGGGCGCGGC CCTTGCGGCC
AAGGAGCCTG CCGACGGCTA CACGCTGTTC GTGGGCTCCA TCCACCATGC GGTGAACCCG
GCGCTGCAGC CGAAGATGAC CTACGACATA GAGCGCGACT TCGCGCCCGT GAGCTTTGCG
GCCATGTTCC CGGTCTTCCT GGTGGCCCAT CCCTCGGTGC CCGCCAGCAA TGTGCGCGAG
CTGATCGCGC TGGCCAAGTC CGGCAATGGC CTGAGCTTCG GCTCCTCGGG CAATGGCGGC
GGCACGCACC TGGCTGGCGA GCTTTTCAAC ATGCATGCAG GCATCAAGCT GCAGCACATT
CCCTACAAGG GCAGCGCGCC GGCCATGAAC GACCTGCTGG GCGGCCAGGT GCAGCTGATG
TTTGCCGATG CGCCCAGCGC GCTGCAGCAC ATCAAGTCCG GCCGCATCAA GGTGCTGGGC
GTGGCCAGCC GCCAGCGCTC GGCCATGCTG CCCGAGGTGC CCACCATTGC CGAGTCGGGC
CTGCCCGAGT ACGAGGCCTA TTCCTGGGCC GCGCTGTTTG CGCCGGCCCG CACACCGCCC
GCCGTGCTGG CGCGCATCAA CGCCGACTTC AACACCGCGC TGCGCGATGC CGCCGTGCGC
CAGCGCCTGC TGACGGCGGG CGCCGAGGCC GACCCCGGCA CCCAGCAGCA GATGCGCGAG
CGCCTGAGCA GCGAGCTGCG CAAATGGGCC CAGGTGGTCA AGGTGGCCGG CATCCAGGCG
GACTGA
 
Protein sequence
MPPSSLPSSC PSSFSSQRRR LLSAGGALAA SSLLPAARVA HAADAWPTRP VRFIVPFPPG 
GPVDTTARAF TQKLGEIWQQ PNLVDNRAGA GGMVGAALAA KEPADGYTLF VGSIHHAVNP
ALQPKMTYDI ERDFAPVSFA AMFPVFLVAH PSVPASNVRE LIALAKSGNG LSFGSSGNGG
GTHLAGELFN MHAGIKLQHI PYKGSAPAMN DLLGGQVQLM FADAPSALQH IKSGRIKVLG
VASRQRSAML PEVPTIAESG LPEYEAYSWA ALFAPARTPP AVLARINADF NTALRDAAVR
QRLLTAGAEA DPGTQQQMRE RLSSELRKWA QVVKVAGIQA D