Gene Daci_0179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0179 
Symbol 
ID5745715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp203540 
End bp204772 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content66% 
IMG OID641295241 
Productformamidase 
Protein accessionYP_001561210 
Protein GI160895628 
COG category[C] Energy production and conversion 
COG ID[COG2421] Predicted acetamidase/formamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGATA CGCTGATCAA GGTGGACCTG AACCGCCCGC CCACCGACAA CGAAAGAGTC 
CACAACCGCT GGCACCCGGA CATTCCCATG GCCTGCTGGG TCCAGCCCGG CGACGACTTC
ATCCTGGAGA CCTACGACTG GACCGGCGGC TTCATCAAGA ACAACGACAG CGCCGACGAT
GTGCGCGACA TCGACCTGAC CACGGTGCAC TACCTGTCCG GACCCGTGGG CGTGAAGGGC
GCCCAGCCCG GCGACCTGCT GGTGGTGGAC CTGCTGGACA TAGGCGCCAA GCCCGACAGC
CTCTGGGGCT TCAACGGCTT TTTCTCCAAA AACAATGGCG GCGGCTTCCT GACCGACCAT
TTCCCCTCGG CCCAGAAATC GATCTGGGAC TTCAAGGGCA TGTTCACCAG CTCGCGCCAT
ATCCCGGGCG TGAACTTCCC CGGCCTCATC CATCCCGGCC TCATCGGCTG CCTGCCTGAC
CGGCCCATGC TGGAGATGTG GAACGAGCGC GAGCGCGCCC TCATCGCCAC CGACCCCGAC
CGCGTGCCCG GCCTGGCCAA CCCGCCGTCG GCCGGCACGG CCCACATGGG CCAGATGCGC
GGCGAGGCCC GCGACAAGGC CGCCGCCGAA GGCGCGCGCA CCGTGCCGCC GCGCGAGCAC
GGCGGCAACT GCGACATCAA GGATCTGTCG CGCGGCGCCA AGGTGTTCTT CCCCGTCTAT
GTGGATGGCG CCGGCCTGAG CGTGGGCGAC CTGCACTTCA GCCAGGGCGA TGGCGAGATC
ACCTTCTGCG GCGCCATCGA GATGGCGGGC TGGGTGCACA TGAAGGTCTC GCTGATCAAG
GGCGGCATGG CCAAGTACGG CATCAAGAAC CCCATCTTCA AGCCCAGCCC CATCACGCCG
CGCTATGACG ACTACCTGAT CTTCGAGGGC ATCTCGGTGG ACGAGAGCGG CAGGCAGCAC
TACCTGGATG TCAACGTGGC CTACCGCCAG GCCTGCCTGA ACGCCATCGA ATACCTGAAG
AAATTCGGCT ACAGCGGCGC CCAGGCGTAT TCCATCCTGG GCACGGCGCC CGTGCAGGGC
CATATCAGCG GCGTGGTGGA CGTGCCCAAC TCCTGCGCCA CGCTGTGGCT GCCCACGGGC
ATCTTCGACT TCGACATCAA CCCCAACGCC GCAGGGCCGG TCGTCCAGTT CGACGGCAGC
ATCGACATGC CCCTGTCCCC CGACCTGCGC TGA
 
Protein sequence
MTDTLIKVDL NRPPTDNERV HNRWHPDIPM ACWVQPGDDF ILETYDWTGG FIKNNDSADD 
VRDIDLTTVH YLSGPVGVKG AQPGDLLVVD LLDIGAKPDS LWGFNGFFSK NNGGGFLTDH
FPSAQKSIWD FKGMFTSSRH IPGVNFPGLI HPGLIGCLPD RPMLEMWNER ERALIATDPD
RVPGLANPPS AGTAHMGQMR GEARDKAAAE GARTVPPREH GGNCDIKDLS RGAKVFFPVY
VDGAGLSVGD LHFSQGDGEI TFCGAIEMAG WVHMKVSLIK GGMAKYGIKN PIFKPSPITP
RYDDYLIFEG ISVDESGRQH YLDVNVAYRQ ACLNAIEYLK KFGYSGAQAY SILGTAPVQG
HISGVVDVPN SCATLWLPTG IFDFDINPNA AGPVVQFDGS IDMPLSPDLR