Gene Daci_0177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0177 
Symbol 
ID5745713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp201563 
End bp202774 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content72% 
IMG OID641295239 
Productthiolase 
Protein accessionYP_001561208 
Protein GI160895626 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.96187 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCC GCATCCCCCA ATCCACCCTG GACGCCGCCG CCGTGAACCG CCCGCTGCGC 
GGGCGCGTGG CCATTGCCGG CGCCGCCACC TATGGCTGCG GCGAGGCACC CGGCATGGAC
GACATGACCC TGCTGGTGCG CGCCGCCCAT GCGGCCGTGG CCGATGCGGG CCTGACCATG
CAGGACATCG ACGGCCTGGC CACCTGCAGC GTCAACGCCA GCATGTGGAC CATGCCCGTG
ATCGAGCACC TGGGCATCAA CCCCACCTAT GTGGACGGCA CGATGATCGG CGGCAGCAGC
TTCATCGCCC ACCTGCTGCC CGCCATCCGC GCGCTGGAGG CCGGCCAGTG CAAGGCCGTG
CTGGTGTGCT ACGGCAGCGC CCAGCGCTCG GCCACCTTCG GCCGCAAGGA AGGCCAGGCG
GCGCGGCGTT TCCTGGACCC GCAGCCCTAC GAGTTCCCCT ACGAGCCCGT GCTGCCCGTG
ACCGCCTATG CGCTGGCGGC CGCGCGCCAC ATGCACGAGT TCGGCACCAC GCGCGAGCAA
CTGGCCGAGG TGGCCGTGGC CGCGCGTGCC TGGGCCCAGC TCAACCCCGA AGCCTTCATG
CGCGACCCGC TGACCATCGA GGACGTGCTC TCGGCCCGCC CCATCGCCAG CCCCTTGAGC
GTGCGCGACT GCTGCCTGGT GACGGACGGC GCGGGCGCCA TCGTGCTGGT GCGCGGCGAG
CGCGCCCGCG ACCTGCCGCG CCCCCCCGTC TACGTGCTGG GCAATGCCAC CGCCATCTGG
AACCGCCAGA TCTCCTGCAT GCCCGACCTG ACCACCACGG CCGCCGCGCA GTCTGGCGCC
CAGGCCTTTG CCATGGCCGG GCTCACCGCT GCCGACATGG ACATGGCCCA GGTCTACGAC
GCCTTCACCA TCAACACCCT GCTGTTCCTG GAGGACCTGG GCTTTTGCGC CAAGGGCGAG
GGCGGCGCCT TCGTGTCCAA GGGCGGCATC GCGCCCGGCG GGCGGCTGGC CGTCAACACC
AACGGCGGCG GCCTGTCCTG CGTGCACCCG GGCATGTACG GCATCTTTGC GCTGATCGAG
GCCGTGCGCC AGCTGCGCGG CGAGGCCGGC CAGCGCCAGC TGGGACGCCA CCGCACGGCC
GTGGTCCATG GCAATGGCGG CACGCTATCC AGCCAATCCA CGGCGGTGCT GGGAACCGCC
GAAACCCTCT GA
 
Protein sequence
MSARIPQSTL DAAAVNRPLR GRVAIAGAAT YGCGEAPGMD DMTLLVRAAH AAVADAGLTM 
QDIDGLATCS VNASMWTMPV IEHLGINPTY VDGTMIGGSS FIAHLLPAIR ALEAGQCKAV
LVCYGSAQRS ATFGRKEGQA ARRFLDPQPY EFPYEPVLPV TAYALAAARH MHEFGTTREQ
LAEVAVAARA WAQLNPEAFM RDPLTIEDVL SARPIASPLS VRDCCLVTDG AGAIVLVRGE
RARDLPRPPV YVLGNATAIW NRQISCMPDL TTTAAAQSGA QAFAMAGLTA ADMDMAQVYD
AFTINTLLFL EDLGFCAKGE GGAFVSKGGI APGGRLAVNT NGGGLSCVHP GMYGIFALIE
AVRQLRGEAG QRQLGRHRTA VVHGNGGTLS SQSTAVLGTA ETL