Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_0149 |
Symbol | |
ID | 5745685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 162479 |
End bp | 164050 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641295211 |
Product | histidine ammonia-lyase |
Protein accession | YP_001561180 |
Protein GI | 160895598 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2986] Histidine ammonia-lyase |
TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.468789 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACCA TCACGACTCC CGGCCTCACC TCCCGTCCCG GCACCGCGCT GACGCTGCAG CCCGGCCAGG TCAGCCTGGC CCAGCTGCGG GCCATCCAGC AGGGCGGCGT GCGCCTGTCC ATGGCGGCGT CCGCCTACGA GCGCATGCGC GCCGCCCAGG CCCATGTGCA GCACATCGTG GATGAGGACC AGGTCGTCTA TGGCATCAAC ACCGGCTTCG GCAAGCTGGC CTCCACCAAG ATCGCCCATG ACCGCCTGGC AGAGCTGCAG CGCAACCTGG TGCTGTCGCA CAGCGTGGGC ACGGGCGATC CGCTGCCTGA CGCCGTGGTG CGCCTGGTGC TGGCCACCAA GGCCGTGAGC CTGGCGCGCG GCCACTCGGG CGTGCGCCCC GAGCTGGTGG ACGCGCTGCT GGCCCTGGCC AACGCCGACG TGCTGCCCGT GATTCCCGCC AAGGGCTCGG TGGGCGCCTC GGGCGACCTG GCGCCGCTGT CGCACCTGGC CTGCGTGCTG ATCGGCGAAG GCCAGGCCAA GATCGATGGA CAGGTGGTGT CCGGCACCGA GGCCATGCGC CACCTGGGCC TGGAGCCCTT CGTGCTCGGC CCCAAGGAAG GGCTGGCCCT GCTCAACGGC ACCCAGGTGT CCACGGCCCT GGCCCTGGTG GGCCTGTTCC AGGGCGAGAG CGTGTTCGCG GCCGGCCTGG TGGCGGGCTG CCTGACGCTG GAGGCCATCA AGGGCTCGGT CAAGCCGTTC GACGCGCGCA TCCACGAGGC GCGCGGCCAG CTTGGCCAGA TCGCCGTGGC CGCCGCCGTG CGCGAGCTGC TGGACGGCAG CGCCATCGAC ACCTCCCACC CCCATTGCGG CCGCGTGCAG GACCCGTACT CCATCCGCTG CGTGCCCCAG GTCATGGGCG CCTGCCTGGA CAACCTCAGC CATGCGGCCC GCGTGCTGGT GATCGAGGCC AACGCCGCCT CGGACAACCC GCTGGTCTTC GACAACGGCG ACGTGATCTC GGGCGGCAAC TTCCACGCCG AGCCCGTGGC CTTCGCGGCC GACATCATCG CCCTGGCCCT GGCCGAGATC GGCGCCATCT CCGAGCGCCG CATGGCCCTG CTGCTGGACA CCGGCCTGTC GGGCCTGCCG GCCTTCCTGA TTGCCGACAG CGGCGTGAAC TCGGGCTTCA TGATCGCCCA GGTCACGGCC GCCGCCCTGG CTGCCGAGAA CCAGTGCCTG GCCCATCCCA GCAGCGTCAC CAGCCTGCCC ACCTCGGCCA ACCAGGAAGA CCATGTCTCC ATGGCCACCT ACGGCGCGCG GCGCCTGGGC GAGATGGCGC GCAACACCGC CGTCATCGTG GGCGTGGAAG CCATGGCCGC CGCCCAGGGC ATGGACTTCG ACCGCAGCCT GAACAGCTCC GAGTTGATCG AGGCGCAGTA CGCGCTGATC CGCAGCCAGG TTCCGCACCT GGACCGTGAC CGCTACCTGG CACCCGACAT CGAAACCATG CGCCAGTGGG CGCTTGCCAC GGACTGGCCC CAGGCCATCG TCCGCCACCT GCCCAGCCTC CAGGCTGCCT GA
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Protein sequence | MNTITTPGLT SRPGTALTLQ PGQVSLAQLR AIQQGGVRLS MAASAYERMR AAQAHVQHIV DEDQVVYGIN TGFGKLASTK IAHDRLAELQ RNLVLSHSVG TGDPLPDAVV RLVLATKAVS LARGHSGVRP ELVDALLALA NADVLPVIPA KGSVGASGDL APLSHLACVL IGEGQAKIDG QVVSGTEAMR HLGLEPFVLG PKEGLALLNG TQVSTALALV GLFQGESVFA AGLVAGCLTL EAIKGSVKPF DARIHEARGQ LGQIAVAAAV RELLDGSAID TSHPHCGRVQ DPYSIRCVPQ VMGACLDNLS HAARVLVIEA NAASDNPLVF DNGDVISGGN FHAEPVAFAA DIIALALAEI GAISERRMAL LLDTGLSGLP AFLIADSGVN SGFMIAQVTA AALAAENQCL AHPSSVTSLP TSANQEDHVS MATYGARRLG EMARNTAVIV GVEAMAAAQG MDFDRSLNSS ELIEAQYALI RSQVPHLDRD RYLAPDIETM RQWALATDWP QAIVRHLPSL QAA
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