| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0143 |
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| Symbol | |
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| ID | 5745679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 156410 |
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| End bp | 157651 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641295205 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001561174 |
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| Protein GI | 160895592 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.235606 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGT CCTCCCCCCT TACCGCCCGC CCGCTGGACG GCGTGCGCAT TCTCGACTTC
ACGCGCGTGC TGGCCGGGCC GCTGTCCACG GCCCTGCTGG CCGACCTGGG CGCCGAGGTC
GTCAAGATCG AGCCGCCGCA GGGCGACGAC TACCGCGCCA TCGGCCCCAT GAACAACGGC
GAGAGCGCGC TGTTCACGGT GATGAACCGC AACAAGCAAA GCCTGGTGCT GGACCTCAAG
CACCCCGAGG CCGTGGCCCT GGTCCACGAG ATGGCGGCCC AGGCCGACGT GGTGGTGGAG
AACTTCCGGC CCGGCGTGGC CGAGCGCCTG GGCATAGGCG CAAGCCAGTT GCGGGCGCTC
AATCCGCGCC TGGTCTATGT CAGCGTCTCG GGTTTCGGCC AGACCGGGCC GCTGGCCCAC
CGGCCGGCCT ACGACATCAT CGTGCAGGCC ATGAGCGGCC TCATGGAGGC CACGGGCGAG
CCCGATGGCG CGCCCACCGT GGTGGGCGAG GCCGTCAGCG ACGTGGTGGC CGGCCTGTTC
GCCTCCTGGG CCACGCTGGC CGCGCTGCTG CAGGCCCGCG CCACGGGACA GGGCCAGCAG
GTGGACGTGG CCATGTTCGA CACCACGCTG AGCTTTCTGG CCACCTCGGT GGCGCGCTAC
CTGTTCACGG GCCGGCCCGC GCGCCGCGTA GGCAACCGCC ATCCGCTGTC CGCGCCGTTC
GGCGTGTACC GCGCAGGCGA CGGCCACTTC GCGCTGGCCG TGCTCAACAA CAAGCTGTTC
GCCGCCGCCC TGCAGGCCAT GGAACTGGGC AGCCTGGCCG GCGACCCGCG CTTTGCCAGC
GACGAATCAC GCTCGGCCCA CGAACCCGCG CTGCGCGAGG CCATCGAGGC CTGGGCCGGC
CGGCATGAAG TGGCGCAGGT GGTGGCCGCG CTGGATGCAG CCGGCGTGCC CGCCGCACCC
ATCTGGAACA TTGCCCAGGC GCTGGAATCG CCCCAGAGCC AGGCACGCGG CCTGCTCGGC
GCGGTGCAGG ACCCGCGCCT GCCCGGCCTG CGCCTGCCCA CCCAGCCCGT GCATTTCAGC
GGCGCCGCAC CCAACCGCGC CGAGCGCGCA CCGGCCCTGG GCGAGCACAC CGACGCCCTG
CTCTCGCAGT GGCTGGGCCG GGGCGCCGAA GCCATTGCCG CGCTGCGCGC ATCCGGTGCC
CTGGGCACCG CAGCCGCGGC CCCCTCTTCC CCATCACATT GA
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| Protein sequence | MTKSSPLTAR PLDGVRILDF TRVLAGPLST ALLADLGAEV VKIEPPQGDD YRAIGPMNNG
ESALFTVMNR NKQSLVLDLK HPEAVALVHE MAAQADVVVE NFRPGVAERL GIGASQLRAL
NPRLVYVSVS GFGQTGPLAH RPAYDIIVQA MSGLMEATGE PDGAPTVVGE AVSDVVAGLF
ASWATLAALL QARATGQGQQ VDVAMFDTTL SFLATSVARY LFTGRPARRV GNRHPLSAPF
GVYRAGDGHF ALAVLNNKLF AAALQAMELG SLAGDPRFAS DESRSAHEPA LREAIEAWAG
RHEVAQVVAA LDAAGVPAAP IWNIAQALES PQSQARGLLG AVQDPRLPGL RLPTQPVHFS
GAAPNRAERA PALGEHTDAL LSQWLGRGAE AIAALRASGA LGTAAAAPSS PSH
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