| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0141 |
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| Symbol | |
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| ID | 5745677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 153096 |
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| End bp | 155129 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641295203 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_001561172 |
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| Protein GI | 160895590 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.148561 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCTG TTGCGGCCTC CGGGCCGCAG CGCATTTTTT GCGGGAAGCG CCCGCATCCC
GCTCCCTCCC GCGCCAGCCG CCTCTGCCGA AAGAAGTCCC CGTTGTCCGC CGCGCATTCC
GTCCTGCAAG CCGTGTTCGG CTACGAACAA TTCCGCGGTC CGCAGGAGGC CATCGTCTCG
CACGTGGTCG CCGGCGGCGA TGCGCTGGTG CTCATGCCCA CGGGCGGCGG CAAGAGCCTG
TGCTACCAGG TGCCGGCCAT CGTGCGCCAG CAGCAGGGCC ACGGCGTGGC GGTGGTGGTG
TCGCCGCTGA TCGCGCTCAT GCACGACCAG GTGGGCGCGC TGCACGAGGC CGGCGTGAGC
GCCGCCTACC TGAACTCCAC GCTGTCCTAT GACGAGACGC AGGAAGTCGA ATGGCGCCTG
CAAAGCGGCG ACATCACATT GCTGTATGCC GCGCCCGAGC GCCTGAACAC GCCGCGCTTC
CTGGGCCTGC TCGACGACCT GCATGCCCAG GGCAAGCTGT CGCTGTTCGC CATCGACGAG
GCGCACTGCG TGAGCCAGTG GGGCCATGAC TTCCGGCCCG AGTACCGCGC GCTGAGCGTG
CTGCACGAAC GCTATGCGGG CGTGCCGCGC ATTGCGCTCA CGGCCACGGC CGACGCACTC
ACGCGCGCCG ACATCGTCGA GCGGCTGCAG CTGGAGAGCG CACGGCACTT CGTCAGCAGC
TTCGACCGCC CCAACATCCG CTACCGCATC GCCGAGAAGA AGGACGTCAG CAACCAGCTG
CTGCGCTTCA TCGAGCGCGA GCACGAGGGC GAGGCCGGCG TGGTCTATTG CCAGTCGCGC
AAGCGCGTGG AGGAGCTGGC CCAGACGCTG AGCCAGGCCG GCGTGCCCGC CCTGCCCTAC
CACGCGGGCC TGCCCTTCGA GACGCGCCAG CTGCACCAGG ACCGCTTCCT GCGCGAGGAC
GGCATCGTCA TCGTGGCCAC CATCGCCTTC GGCATGGGCA TCAACAAGCC CGATGTGCGC
TTCGTGGCCC ACGTGGACAT GCCCAAGAAC ATCGAGGGCT ACTACCAGGA AACCGGCCGC
GCAGGCCGCG ACGGGCTGCC CGCCGATGCC TGGATGGCCT ACGGCCTGTC CGACGTGGTC
AACCAGCGCC GCATGATCGA CGAAAGCCCG GCCGAGGACA CCTTCAAGCA GGTCATGCGC
GGCAAGCTCG ATGCCCTGCT GGGCCTGGCC GAGGCCACGG ACTGCCGCCG CGTGCGGCTG
CTGGCCTACT TCGGCGAGCA GTACGGCCTG GGCGCACCGG GAGAAGACGC AGAGACGGAC
CTTGAAGGCA GGCCGCTGCA GCGCGTGGCA AAGACCGCCT GCGGCAACTG CGACAACTGC
ATGGAGCCCC CGGCCCTGTG GGATGGCACG GACGCCGCGC GCAAGCTGCT GTCCACCATC
TACCGCGTGC ACGAGGCCAG CCAGCTGACC TTTGGCGCGG GCCACATCAT GGACGTGCTG
CGCGGCAAGG ACACCGAGAA GGTGCGCCAG TACGGCCACG ACAAGATCTC CACCTTCGGC
CTGGGCAAGG ACTACAGCGA GCCCCAGCTG CGCGGCGTGA TGCGCCAGCT GCTGGCCACG
GGCGCCCTGG GCCTGCACAA GATCACCAGC GAGAACAGCG GCCACAGCTT CGACACGCTG
TGCCTGGCCG ATGGCTCGCG CGACGTGCTG CGCGGCAACG TCCCCGTGCA GCTGCGCGAG
GCCGTGGCCG CGCCGCGCAC GCGCACCTCC AAGCGCGCCA CCCAGCCCAA CGCGGCCGCC
GCCAGCCTGG GCCCCGACGC CCAGGTGCGC TTCATCAACC TCAAGGCCTG GCGCGCCGAG
GTCGCGCGCG AGCACAACCT GCCCGCCTAC GTCATCTTCC ACGACGCCAC GCTGGCCGCC
ATTGCCGAAC GCAACCCGGC CTCGCTGGAC GACCTGCAGG GCATCAGCGG CATGGGCGCC
AAGAAGCTCG ACGCCTATGG CGCCGAGGTG CTGCGGGTGG TGGCCACGGG TTGA
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| Protein sequence | MAAVAASGPQ RIFCGKRPHP APSRASRLCR KKSPLSAAHS VLQAVFGYEQ FRGPQEAIVS
HVVAGGDALV LMPTGGGKSL CYQVPAIVRQ QQGHGVAVVV SPLIALMHDQ VGALHEAGVS
AAYLNSTLSY DETQEVEWRL QSGDITLLYA APERLNTPRF LGLLDDLHAQ GKLSLFAIDE
AHCVSQWGHD FRPEYRALSV LHERYAGVPR IALTATADAL TRADIVERLQ LESARHFVSS
FDRPNIRYRI AEKKDVSNQL LRFIEREHEG EAGVVYCQSR KRVEELAQTL SQAGVPALPY
HAGLPFETRQ LHQDRFLRED GIVIVATIAF GMGINKPDVR FVAHVDMPKN IEGYYQETGR
AGRDGLPADA WMAYGLSDVV NQRRMIDESP AEDTFKQVMR GKLDALLGLA EATDCRRVRL
LAYFGEQYGL GAPGEDAETD LEGRPLQRVA KTACGNCDNC MEPPALWDGT DAARKLLSTI
YRVHEASQLT FGAGHIMDVL RGKDTEKVRQ YGHDKISTFG LGKDYSEPQL RGVMRQLLAT
GALGLHKITS ENSGHSFDTL CLADGSRDVL RGNVPVQLRE AVAAPRTRTS KRATQPNAAA
ASLGPDAQVR FINLKAWRAE VAREHNLPAY VIFHDATLAA IAERNPASLD DLQGISGMGA
KKLDAYGAEV LRVVATG
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