| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0129 |
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| Symbol | |
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| ID | 5745665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 140220 |
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| End bp | 140924 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641295191 |
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| Product | 2,3-diketo-5-methylthio-1-phosphopentane phosphatase |
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| Protein accession | YP_001561160 |
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| Protein GI | 160895578 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4359] Uncharacterized conserved protein, possibly involved in methylthioadenosine recycling |
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| TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01489] 2,3-diketo-5-methylthio-1-phosphopentane phosphatase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.65091 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.803549 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAGC GCATTCCCCT GTATCTGGAC ACCGCCGCCC CCGGCTGGAT GGTGCAAAGC
GACTTCGACG GCACGATCAG CCTGCTGGAC GTGACCGACA CCCTGCTCAA CCGCTTCGGC
AAGCCCGGCT GGCAGGAACT GGAAGACGCC TGGGAGCGCG GCGAGATCGG CTCGCGCGAA
TGCATGAAGG GCCAGGTCGC GCTGCTGGAC ATGGACGAGG CCGAGCTGCG CGCCCACCTG
GACACCATCG AGATCGACCC CGGCTTTGCC GGCTTCGTGG CTGCCGCCCA GGCCCACGGC
ATGGTGGTGC AGGTGGTCAG CGACGGCATC GACTACGCCA TACGCCATGT GCTGGAGCGC
CATGGCCTGG GCCATCTGCA GGTCATCGCC AACCGCCTGG TGCAGACCGG CGAGCGCAGC
TGGCGCCTGG ACTCCCCCTG GGCCAGCGCG CAGTGCGCGC GCGCCAGCGG CAACTGCAAG
TGCGAGCGCC TGGCCGAGCA GCAGGCCCTG CACGGCCGCG TGCTCTACGT GGGCGACAGC
ACCTCGGACT TCTGCGTCTC GGGACGGGCC GATTTCGTGC TGGCCAAGTA CAAGCTCATC
GCCCACTGCG AAAGCCGGGG CATCGCCCAT GCGCCCTTCG AGCATTTCGA GCAGGCCACG
TCCCTCCTCG ACAAGGTCGT CCTGGGCCTG GAGGCGCTGG CATGA
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| Protein sequence | MNKRIPLYLD TAAPGWMVQS DFDGTISLLD VTDTLLNRFG KPGWQELEDA WERGEIGSRE
CMKGQVALLD MDEAELRAHL DTIEIDPGFA GFVAAAQAHG MVVQVVSDGI DYAIRHVLER
HGLGHLQVIA NRLVQTGERS WRLDSPWASA QCARASGNCK CERLAEQQAL HGRVLYVGDS
TSDFCVSGRA DFVLAKYKLI AHCESRGIAH APFEHFEQAT SLLDKVVLGL EALA
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