| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0127 |
|---|
| Symbol | |
|---|
| ID | 5745663 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 138528 |
|---|
| End bp | 139286 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641295189 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001561158 |
|---|
| Protein GI | 160895576 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.713745 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.982283 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTGA TGAATGCCCA CTCCCCCGCG CCCACGGCGG CGCCCCGCAC GGCACCCAGC
CTGGAGGCCG TGCGCCTGTG CAAGTCTTTC CTGTCGGGCA TGGTCAGCGT GCAGGTGCTG
CAAGGCCTGT CCGTGTCGCT GTACCCGGGC GAGCTGAGCC TGATCTCCGG GCCCTCGGGC
TGCGGCAAGA GCACGCTGCT GTCGCTGATG TCGGGCCTGC AGGCGCCCGA CAGCGGCCAC
GCCATGGCGC TGGGCGAGGA CCTGGGCAAG CTGGGCACGC GGGCGCTGGA GAAATTCCGC
CTGCGCCACA CGGGCTTCGT CTTCCAGGGC TTCAACCTGT TCCCGGCGCT GACGGCCATC
GAGCAGGTAC AGCTGCCCCT GGGCTACATG GGCCTGCGCA GCGACGAGGC CCTGCGCCGC
GCCCAGCAGG CGCTGGACGA GGTCGGCCTG TCCCACCGCA GCCACATGCG CCCGGCCGAA
CTGTCGGGCG GCGAAAAGCA GCGCGTGGCC ATCGCCCGCG CCATGGCCAA GGCGCCGCAG
CTGCTGTTTG CCGACGAACC CACGAGTGCG CTGGATGCCG AAAGCGGCCA GCGCGTCATC
GACATCCTGC ACCGCGCGGC GCGCAACCAT GGCACGACCG TGCTGTGCGT GAGCCATGAC
CCGCGCCTGG TGCGCCATGC CGACCGCGTG CTCGGCATGG AGGACGGCGC CATCCGCAGC
GACTGGCGCC AGTCCTGCCC CATCAAGGAA AAAGAATGA
|
|---|
| Protein sequence | MNVMNAHSPA PTAAPRTAPS LEAVRLCKSF LSGMVSVQVL QGLSVSLYPG ELSLISGPSG
CGKSTLLSLM SGLQAPDSGH AMALGEDLGK LGTRALEKFR LRHTGFVFQG FNLFPALTAI
EQVQLPLGYM GLRSDEALRR AQQALDEVGL SHRSHMRPAE LSGGEKQRVA IARAMAKAPQ
LLFADEPTSA LDAESGQRVI DILHRAARNH GTTVLCVSHD PRLVRHADRV LGMEDGAIRS
DWRQSCPIKE KE
|
|---|
| |